Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3121 ATGGCGTCTTCACCTGCATCTTTGGCATTCACAGTGCGGAGGTGTGAGCCGGAGCTGGTAGCTCCATCTCAACCCACCCCTCGTGAACTGAAACTGCTTTCAGATATAGATGACCAAGAAGGCCTGCGGTTCCAAATTCCAGTGATACAGTTCTACCGCTATGATCCATCAATGACTGGGAAGGACCCCGTTGAGGTGATTCGAAAGGCATTGGCTAAAACACTTGTGTTTTACTATCCTCTTGCAGGTAGACTCATGGAAGGGCCTGATCGAAAACTCATGGTGAATTGTACTGCTGATGGTGTTTTATTCATTGAGGCAGACGCAGATGTCACCATGAAACAATTTGGTGATGCTCTTCAACCTCCCTTCCCTTGTTGGGAGGAGCTCCTTTACGATGTTCCCGGTTCCAGTGAAGTGCTTAACGCTCCATTGTTGCTTATACAAGTAACGCGGCTCAAGTGTGGAGGTTTCATTTTCGCACTTAGATTGAACCATACTATGAGTGATGCAGCTGGTTTGGTTCAATTTTTGAATGCCTTAGGTGAAATTGCTCGCGGCATGGGCGAACCTTCAATTCTACCAGTGTGGCATAGAGAGCTACTAAATGCAAGGGACCCTCCAAAAGTAACTTGCACCCATCATGAATATGAACAAGTACCTGACACCAAGGGAACCATCATCCCCCTAGATGACATGACTCATCGGTCTTTCTTTTTTGGTCCCACTGAAGTAGCTACAATTCGTAGTTTCCTTCCTCTCCATCAACGTCAATGCTCCAAATTTGAAATTCTCACTGCATTTCTTTGGCGTTGTCGCACAATAGCATTGCAACCAGACAACGATGAGGAGGTTCGCATCCTTTGCATTGTTAATGCACGTGAAAAGTTTAACCCTCCATTACCAACAGGCTACTATGGCAATGCTTTTGCATTTTCTCCTGCAGTTACAAGTGCTAAGAAGTTATGTGAAAATCCTTTAGGTTATGCATTGGAGTTGGTAAGGAAAGCAAAAGCTGATATTACTCAAGAGTATATGCATTCATTGGCAGATTTAATGGTCATTAAGGGACGACCACACTTCACTGTGGTAAGATCGTATCTTGTGTCAGATGTCACACGTGCTGGGTTTGGAGGGGTCGACTTTGGGTGGGGGAAGGCTGTTTATGGAGGGCCAGCCAAGGGAGGAGTTGGAGCCATACCCGGTGTGGCTAGCTTTTACATAGCCTTTAAAAATGCTAAAGGCGAGGAAGGTTTAGTGATACCAGTTTGTTTACCATCAGAAGCCATGGAAAGGTTCACAAAAGAGTTGGATAATGTGCTTAAGAACCATATCGAACCTACTACGCGTGGCTTCAAATCCAGTTTCATTGTTTCTTCAATATAG 1386 0.4502 MASSPASLAFTVRRCEPELVAPSQPTPRELKLLSDIDDQEGLRFQIPVIQFYRYDPSMTGKDPVEVIRKALAKTLVFYYPLAGRLMEGPDRKLMVNCTADGVLFIEADADVTMKQFGDALQPPFPCWEELLYDVPGSSEVLNAPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLVQFLNALGEIARGMGEPSILPVWHRELLNARDPPKVTCTHHEYEQVPDTKGTIIPLDDMTHRSFFFGPTEVATIRSFLPLHQRQCSKFEILTAFLWRCRTIALQPDNDEEVRILCIVNAREKFNPPLPTGYYGNAFAFSPAVTSAKKLCENPLGYALELVRKAKADITQEYMHSLADLMVIKGRPHFTVVRSYLVSDVTRAGFGGVDFGWGKAVYGGPAKGGVGAIPGVASFYIAFKNAKGEEGLVIPVCLPSEAMERFTKELDNVLKNHIEPTTRGFKSSFIVSSI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3121 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 446 - -
Lja3g3121 461 Pfam Transferase family 14 437 - -
Lja3g3121 461 Gene3D - 7 216 IPR023213 -
Lja3g3121 461 Gene3D - 217 437 IPR023213 -
Lja3g3121 461 PANTHER - 10 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3121 Lja-Chr3 59641997 59644770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3121 43 437 Monolignol Biosynthesis Gene Families AT5G48930 29.356 1.97e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3121 K19861 - gmx:100797017 771.155