Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3114 ATGGTGGGAACTCCGATTACTCCGATTAATGGAAGAACAAGGCTTTCTTTTGGTGTTGTAAATGGTGGCCATGACCTTGGCCCAAGTAGCACTCCACCAAGCAATGCTGGGTCTGATTATGGCAGTGTTGAGTTCACAAGAGAGGATGTGGAGGCCTTGCTGAATGAAAAATCTAAAAGGAAAGACAGATTTAACTATAAGGAGAGGTGTGAAAATATGATAGATTATATAAAAAGGCTCAAGGTTTGCATCAGATGGTTCCAAGACCTTGAGTTAAGCTACTCACTGGAGCAAGAAAAACTAAAGAATTCATTGGAATTAAACCAGCAGAAATGCATGGAATTAGAGTTTCTACTCAAAATCAAGGAAGAAGAACTAAATTCAATCATTGTGGAGCTGAGAAGGAATTGCTCTTCTTTCCAAGAGAAGTTAATGAAGGAAGAATCGGAAAAAACGGCCGCAGTGGAGTCTCTTGTTAAGGAGAAAGAGGCTAGGCTTAACTTCGAGAGATCACAGGCTACATTATCGGAGGATCTTGAGAGAGCTCAGCGAGAGCTTCAAACATCAAATCAAAAGATATCATCACTCAATGACATGTATAAGCAATTACAAGATTACATAACTAGCTTACAGCAGTACAATGGAAAACTTCATTCAGAGCTTTCTTCAGCTGAAGAGGAACTTAAGCGCGTAGAGAAAGAGAAGGCTACTGTAGTGGAGAACCTTACTATGTTAAGGGGTCAGCTTACTTTGTCTATGTCCTCTCAAGAAGAAGCAACAAAACAGAAGGAAATTTTAGCCAGTGAAGTTGCATCTCTTCGAGTGGAGTTGCAACAAGTGAGGGATGATCGGGACCGCCAATTATCTCAACTGCAAACTTTAACTTCTGATTTAGTGAAGTTTAAAGATTCTTCAGAAAAATCTTGCTCCGAACTGAACAACTTGGCTATAAAAACAAATGAACTGGAGGAAAAATGTAGTTTGCAAGATAACCAGTTAAAGGCATTACAAGAGCAGCTGGAATCTGCCGAAAAGAAATTGCAGGTTTATGATATATCTGCTATCGAGACAAGAACAGAGTTTGAAGGGCAACAAAAACTTGTGAATGAGTTAGAAAGACGCTTGGCTGATGCTGAATCTAAAGTGATAGAAGGGGAGAAGCTGAGGAAAGAATTACATAACACCATTTTGGAACTAAAAGGGAACATTCGTGTGTTCTGTAGAGTCCGGCCTCTGTTGCCTGATGAAGGTTGCAGCACTGAAGGCAAGATTGTTTCTTATCCCACATCGATGGAGGCTTCTGGACGAGGAATCGAGTTGACCCAAAATGGCCAAAAACATTCTTTTACGTTTGATAAAGTTTTTGCACCTGATGCACGACAAGAAGAAGTTTTCACAGAAATTTCACAGCTTGTGCAAAGTGCTCTCGATGGTTATAAGGTTTGCATTTTTGCCTATGGTCAAACAGGGTCTGGTAAAACCTATACAATGATGGGCAGGCCTGGATTTCCGGGAGAAAAGGGTTTGATACCTCGATCACTCGAACAAATATTTCAAACAAGACAGTCTCAGCAGCCCCAAGGATGGAAATACGAAATGCAGGTATCAATGTTGGAAATATACAATGAAACCATTCGTGATCTGTTATCTACAAATCGGTCGACATCAGATGCGGCACGCGTAGAAAATGGTACTCCTGGAAAGCAATACACGATCAAGCATGATGCCAGTGGAAATACTCACGTTACTGATCTTACAGTAGTGGATGTTGAAAGTGTAAAAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAATTGCAGGTCTGTGGGAAAAACTCAGATGAATGAACAATCTTCGAGAAGTCATTTTGTATTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGATCAACAAGTACAAGGTGTTCTGAATCTTATTGATCTCGCTGGGAGTGAGCGTCTCTCAAGAAGTGGGTCAACCGGGGACCGATTGAAAGAAACTCAAGCAATAAATAAAAGTCTGTCATCATTGAGTGATGTTATATTTGCCTTAGCCAAGAAGGATGATCATATCCCATTCAGGAACTCAAAGCTTACATATCTACTTCAGCCTTGTCTAGGTGGGGACTCGAAGACATTAATGTTTGTAAACATCTCTCCTGACCAAGCGTCAGCAGGGGAGTCTCTATGTTCACTTCGGTTTGCATCAAGAGTAAATGCTTGTGAAATTGGGACACCTCGGCGTCACACAAACGTGCGTCCTACAGAATCTCGTTTGAGCTACTTCTGA 2292 0.4092 MVGTPITPINGRTRLSFGVVNGGHDLGPSSTPPSNAGSDYGSVEFTREDVEALLNEKSKRKDRFNYKERCENMIDYIKRLKVCIRWFQDLELSYSLEQEKLKNSLELNQQKCMELEFLLKIKEEELNSIIVELRRNCSSFQEKLMKEESEKTAAVESLVKEKEARLNFERSQATLSEDLERAQRELQTSNQKISSLNDMYKQLQDYITSLQQYNGKLHSELSSAEEELKRVEKEKATVVENLTMLRGQLTLSMSSQEEATKQKEILASEVASLRVELQQVRDDRDRQLSQLQTLTSDLVKFKDSSEKSCSELNNLAIKTNELEEKCSLQDNQLKALQEQLESAEKKLQVYDISAIETRTEFEGQQKLVNELERRLADAESKVIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGCSTEGKIVSYPTSMEASGRGIELTQNGQKHSFTFDKVFAPDARQEEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGFPGEKGLIPRSLEQIFQTRQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNRSTSDAARVENGTPGKQYTIKHDASGNTHVTDLTVVDVESVKEVAFLLNQAANCRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKDDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQASAGESLCSLRFASRVNACEIGTPRRHTNVRPTESRLSYF* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3114 763 SUPERFAMILY Tropomyosin 214 399 - -
Lja3g3114 763 Coils Coil 256 297 - -
Lja3g3114 763 ProSiteProfiles Kinesin motor domain profile. 402 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3114 763 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 762 - -
Lja3g3114 763 Coils Coil 130 150 - -
Lja3g3114 763 Coils Coil 361 388 - -
Lja3g3114 763 Coils Coil 165 199 - -
Lja3g3114 763 Pfam Kinesin motor domain 408 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3114 763 Coils Coil 214 241 - -
Lja3g3114 763 CDD KISc_C_terminal 400 744 - -
Lja3g3114 763 Coils Coil 319 353 - -
Lja3g3114 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 740 IPR027417 -
Lja3g3114 763 Gene3D Kinesin motor domain 350 744 IPR036961 -
Lja3g3114 763 MobiDBLite consensus disorder prediction 27 41 - -
Lja3g3114 763 MobiDBLite consensus disorder prediction 21 41 - -
Lja3g3114 763 PANTHER KINESIN-LIKE PROTEIN 10 762 - -
Lja3g3114 763 PRINTS Kinesin heavy chain signature 478 499 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3114 763 PRINTS Kinesin heavy chain signature 612 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3114 763 PRINTS Kinesin heavy chain signature 692 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3114 763 PRINTS Kinesin heavy chain signature 643 661 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3114 763 ProSitePatterns Kinesin motor domain signature. 642 653 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja3g3114 763 SMART kinesin_4 400 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3114 Lja-Chr3 59433501 59445222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3114 87 752 Calmodulin-binding Proteins AT5G65930 32.000 4.28e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3114 K10405 - gmx:100814696 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3114 3 59433501 59445222 Lja3g3114 3 59433501 59445222 PCT