LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g3090	ATGGAAGCGGCTTTGGCAGCTTCCTCGTACAGGAGAATATTAATAATAACGACGACCATCCTGTGGTTGTCGTCGGTTTGCAATGGACAGGTTTTCGCGGTGGGGGGGCCGCCCAAGGCGACGGAGATGGACAGCTGCGACGGGATATTCCTGACGTACACGCTGACAGCACGTGAGATGGAGTACCCGCACGTGAAGAACATATCGAAGCAGGCGTGGGCGTTCAAGGCGGAGGCGTCATTGATGAATGTTGGGGACGAAGAGCTGAAGGATTGGAAGATGTACATCGGGTTCCAGCACAGGGAGATTCTGGTCTCGGCCGATGGGGCCGTTCCCATTGACTCGGAGGACTTTCCGGCCGAGGTTGGAAACGGTACCACGTTAGCCGGGAACCCTGTGACTGACCTGAAGACGGCCATAGAGACTGCCGGGGATTACACGCAGATGGCGGTGACGGTCGCAATGAGTGGCACACAGTTTGGACTAGGCAAAGGTGCCACCCCGATGCCCAAGACTATCAAGCTCGTCAATGATGGCTTCAAATGCCCCGCAGCCTCTCGTAAAGGTTCGAGAATGTTTGTATGCTGCAGGAAGGACCCAAAAGCCAAAGCAAAACTAGCAAAGAAAACCAAGTTTCTCCCTCGCCGCTATGGCGACCTAACCATCGCCTACGACGTCCTCCAAGCCTTCCAGACGAGCTACTCCGTCCAACTCACCATCGACAACAACCACCCACTCGGCCGTCTCGACCACTGGAACCTCACATGGGAATGGCAAAAGGGAGAGTTCATCTACTCCTTGAAAGGCGCCTATGCTCGCATTAAGGACCAATCAGAATGCCTCTACGGCCCCGCCGGAAAATACTACAGGGACCTTGATTTCTCAAACGTCGCCAATTGCCAGAAAAAGCCCATCCTCTCCGACCTCCCCGCCGAGAAAAAGGAAGATGAAAAGGTAGGTAAACTCCCCTATTGCTGCAAGAACGGCACCGTTTTGCCCCCTGTCATGGACAAGAGCAAAGCCAGATCCATTTTCCAGATGCAGGTCTGGAAAATGCCACCGGATGATAACCGCACGGCTATCACGCCACCGATGAAATGGCACATCGATGGCGTGATAAACCCTAAATACACCTGTGGGCCACCTATCCGGGTTGACCCGCAGGAGTTTCCGGATCCTACTGGGCTCAAGGCGATTTCCACCGCCGTCGCCAGCTGGCAAGTGGTTTGCAACATAACGAAGCCGAAACCGCAGGAGAATCGTTGCTGTGTGTCGTTCTCAGCTTTCTATAATGAATCTGCAATCCCTTGCAATACCTGCGCTTGCGGCTGCCATGATACTACAAAATGCAGCTCTAAGGTGTCTCCGATGCTGCTTCCGCCCGACGCGCTTCTGGTCCCCTTCGTGAACAGGACCATGAAAGCGCGTGCTTGGGCGAAGCTTAAGCATCTTCACGTGCCTGCGAAGATGCCTTGTGGGGATAATTGCCCTGTGAGCATTAACTGGCATGTGAGCTCTGATCATAAAGAAGGGTGGACGGCGAGGATCACGCTATTCAATTGGGAGGAATTTGCATTTGAGGATTGGTTCACTGCTTTGCAGTTCAAGAGGGCTTTTGATGGGTTTGATGATGTGTATTCCTTCAATGGGACTAGAATTCCTGGCATCAAAACTGTTTTCTTGCAAGGGCTAAAAGGTTTGAATTTCTTGTCTGGTGAGACCAATGGGACTCATACTTATGATCCTAGAGTGCCTGGGAAGCAGCAATCTGTGGTTTCATTCAATAAGAAGCACATTAAGGATTTCGATGTCACGCGTGACGCGTTCCCTTCTAAGGTGTTTTTCAATGGAATGGAGTGTGCTCTTCCTCCAGTAAGACCCACCAAGAGTTCAGGGCATCAATCTACCATTAATTTCATTGTAGTCATTTTCACAGCCTTGATGACCTTTTTGATGATGATCTGA	1965	0.5165	MEAALAASSYRRILIITTTILWLSSVCNGQVFAVGGPPKATEMDSCDGIFLTYTLTAREMEYPHVKNISKQAWAFKAEASLMNVGDEELKDWKMYIGFQHREILVSADGAVPIDSEDFPAEVGNGTTLAGNPVTDLKTAIETAGDYTQMAVTVAMSGTQFGLGKGATPMPKTIKLVNDGFKCPAASRKGSRMFVCCRKDPKAKAKLAKKTKFLPRRYGDLTIAYDVLQAFQTSYSVQLTIDNNHPLGRLDHWNLTWEWQKGEFIYSLKGAYARIKDQSECLYGPAGKYYRDLDFSNVANCQKKPILSDLPAEKKEDEKVGKLPYCCKNGTVLPPVMDKSKARSIFQMQVWKMPPDDNRTAITPPMKWHIDGVINPKYTCGPPIRVDPQEFPDPTGLKAISTAVASWQVVCNITKPKPQENRCCVSFSAFYNESAIPCNTCACGCHDTTKCSSKVSPMLLPPDALLVPFVNRTMKARAWAKLKHLHVPAKMPCGDNCPVSINWHVSSDHKEGWTARITLFNWEEFAFEDWFTALQFKRAFDGFDDVYSFNGTRIPGIKTVFLQGLKGLNFLSGETNGTHTYDPRVPGKQQSVVSFNKKHIKDFDVTRDAFPSKVFFNGMECALPPVRPTKSSGHQSTINFIVVIFTALMTFLMMI*	655

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g3090	654	PANTHER	COBRA-LIKE PROTEIN 10	18	653	-	-
	Lja3g3090	654	Pfam	COBRA-like protein	234	413	IPR006918	GO:0010215\|GO:0031225
	Lja3g3090	654	PANTHER	COBRA-LIKE PROTEIN 7	18	653	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g3090	Lja-Chr3	58621089	58624188	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja3g3090	13	654	COBRA Gene Family	AT3G20580	59.604	0.0	813

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g3090	-		-	gmx:100789175	1050.81