Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3088 CTATGCAGAGCCAGTCAAGTTGTTGATTTATTCCCAACTACGTCTCCTGAAATTATTGTCCGAGAGGCTAGGTTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGATGAGGATGGGCAGATTGGTGGCTATGTTAGCGGGATTCTCTATACCAAGCGGTTGCAAAAGAACCTGTTTGGTTGCTATTGGTGGCTTTGATGGGAAATTGAGCCTCAACAAGGGATATGTGGCTGGCATATTGACAGTAGATACCGTTGCGGATTTTCTTCCTAGAAGGGCACTGCTACGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCGGTAAGGGAAAAATTTAGGCAAAAGGGAATAGCTAAACTATTGGTGGCTAAGGCAGAATCACAGGCCAGAAGTTGGGGTTGTCGTGCCATTGCATTACACTGTGATTTGAAAAATCCTGCAGCCACAAAGTTATACAAAGGCCAAGGTTTCAAATGTATCAAGGTTCCAGAAGGAGCTAACTGGCCTCAACCAAAGACTTCACCGGATATTAATTTCCACTTCATGTTGAAGCTTCTCAACAAACCAGTTGCTTCTAAATCTAATTAG 639 0.4382 LCRASQVVDLFPTTSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVMRMGRLVAMLAGFSIPSGCKRTCLVAIGGFDGKLSLNKGYVAGILTVDTVADFLPRRALLRQRRTGIAYISNVAVREKFRQKGIAKLLVAKAESQARSWGCRAIALHCDLKNPAATKLYKGQGFKCIKVPEGANWPQPKTSPDINFHFMLKLLNKPVASKSN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3088 212 Pfam Acetyltransferase (GNAT) family 89 174 IPR000182 GO:0016407
Lja3g3088 212 CDD NAT_SF 107 157 - -
Lja3g3088 212 Gene3D - 12 186 - -
Lja3g3088 212 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 207 - -
Lja3g3088 212 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 18 205 IPR000182 GO:0016407
Lja3g3088 212 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 12 205 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3088 Lja-Chr3 58507566 58508860 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja3g3088 Acetyltransf_1 6.1e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3088 - - adu:107467912 381.719