Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3087 ATGGCTACCTTCATTTTAAGGTCTAATGAAGTAGGTCATGCCTTGGGTTTCTTCTGTCTCCTGGTGTTGGTGCACAAGTGCAATGCCTATGAGTTTGTAGTTGGAGGACAAAAGGGTTGGAGTGTTCCTAGTGACCCAAGTACCAACCCTTACAATCAATGGGCAGAAAAGAGCCGATTTCAAATAGGAGATTCCCTTGTGTTCAATTACCCTTCCGGCCAGGACTCAGTGATTCAAGTAAATAGCCAAGACTTTGCTAGCTGCAACTCTGGTACAAATTCTGATAAATTCTCTGACGGTCATACAGTCATCAAACTAAGCCAATCAGGGCCTCACTACTTCATAAGTGGAAACAAAGATAATTGTCTCAAAAATGAGAAGATTGTGGTGATTGTGCTGGCTGACAGGACTAACAAAAACTCAAACACCAACCAAACAAGCACTGCTTCTTCTCCTTCTCCTTCACCCTCAGTCTCAAGAGAATCATCACCTCCAGTACCAGCACCTGTTCAGCCAGGGGTTCTTCCATCTCCACCACCAGCTGGGACTATAGAGACTCCACCTCCTTCTCAGCAAGGGGCCGCTACATCTCCACCACCAGCACCAGCGACTGTGGTGACAAATTACCCAACTCCAGCTCCTGTTAGTGAACCTCCTCCTCCTAATGCTGCTTCTTCAATCTTGGTCAGCTTTGCTGGTTCTATGGGAGCATTCATGGCTTCAGTTCTGGTTTTATCTTTCTAA 744 0.4597 MATFILRSNEVGHALGFFCLLVLVHKCNAYEFVVGGQKGWSVPSDPSTNPYNQWAEKSRFQIGDSLVFNYPSGQDSVIQVNSQDFASCNSGTNSDKFSDGHTVIKLSQSGPHYFISGNKDNCLKNEKIVVIVLADRTNKNSNTNQTSTASSPSPSPSVSRESSPPVPAPVQPGVLPSPPPAGTIETPPPSQQGAATSPPPAPATVVTNYPTPAPVSEPPPPNAASSILVSFAGSMGAFMASVLVLSF* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3087 247 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Lja3g3087 247 MobiDBLite consensus disorder prediction 158 196 - -
Lja3g3087 247 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Lja3g3087 247 CDD OsENODL1_like 30 133 IPR041846 -
Lja3g3087 247 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Lja3g3087 247 MobiDBLite consensus disorder prediction 139 157 - -
Lja3g3087 247 MobiDBLite consensus disorder prediction 203 221 - -
Lja3g3087 247 Gene3D - 30 146 IPR008972 -
Lja3g3087 247 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 246 - -
Lja3g3087 247 MobiDBLite consensus disorder prediction 139 225 - -
Lja3g3087 247 PANTHER BLUE COPPER PROTEIN 5 246 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3087 Lja-Chr3 58436990 58438174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3087 14 187 Phytocyanin Superfamily AT3G20570 50.000 4.44e-50 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3087 - - adu:107462411 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3087 3 58436990 58438174 Lja3g3087 3 58436990 58438174 PCT