Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3079 ATGGACTCACGATCAAAATATTCAGATATGCTACTCTCTTGGGGATCATGGCTCTTGCGGCCGTTTTGGTCCCTGGTGAGTCGTCGGCATTCTTCCCACCACCTGGGTCCGTTGGCCCAGGGGGGAAGCACAGCTTCCAGTTCCACCACAGTCTTTTCCAACGGAGCACGACGCTACAAATACGACGTGTTCATCAGTTTCAGAGGTTCTGACACTCGCAACACCTTTGTGGATCATCTTTACGCCCATCTCGTCCGAAAAGGCATTTTCGTCTTCAAGGATGACAAGAAGCTCCAGAAAGGAGAGTCCATTTCAGCTCAGCTTCTACAAGCAATTCGAAATTCACGAGTTTCTATTGTTGTTTTCTCGAAAAATTATGCTGAGTCAAGGTGGTGTTTGGATGAAATGGCTGCTATTGCTGAATGCTGTGAAGATTTTAAGCAAACTGTTTTCCCTGTTTTCTATGATGTGGATCCTTCTCCTGTAAGAAACCAGAATGGGGTGTATGAAAATGCCTTTGTTTTCCACATGCTGAGATTCAAACATGATGCAGACAGGGTTGATCGATGGAAGAGAGCTATGAGAAGTTTGGCTGGATCAGCAGGTTGGGATGTCAGGAATAAGCCAGAATTTCGAGAGATTGAAAATATTGTTGAGGCAGTTATAGAAGCATTGGGTCGTAAATTTTCAGGGTTTGCGGATGACCTTATCGGCATACAACCTCGTGTAGAAACTTTGGAAAACCTATTAAAATTAAACTCGGAGTATTATGACTGTCAAGTTATAGGAATTTGGGGGATGGGTGGAATAGGAAAGACAACTCTTGCTACTGTCTTGTATGATAGAATCTCTCATCTGTTTGAAGCTCGCTGTTTTGTTGAGAATGTAAGCAAAGTTTATAGAGATGGTGGTGTTACTGCTGTACAGAAACAAGTTCTTCGTCAAACTGTAGACGAAATGAATCTCGAGACATACAGTCCTTCTGAAATATCTGGAATTGTAAGAGACAGGCTACGCAGCTTAAAGGTTCTAGTAGTTCTTGACAATGTTGATCAATTAGTGCAATTGCAGGAATTTGCTGTAAATCCTGGATTATTTCAGAAAGGAAGTAGAATGATCATTACAACCAGGGATGAGCATATTCTAAAGGTATATGGAGCGCATATAGTGTATGAGGTTCCACTGATGAATAATAATGACGCTCGTGAGCTTTTTTATAGAAAAGGCTTCAAAAGTGATAATCTCTCAAGCAGATGTGCGGAGCTGGTTCCTGAAGTACTTAAATATGCTCAAGGTCTTCCATTGGCAATTAGAGTAACAGGCTCTTTCTTGTGTACTCGAAATGCTATGCAATGGAGAGATGCTTTGGATAGACTGAAGAATAATCCAGACAACAAAGTTATGGATGTGCTTCAGATAAGTTTTGAGGGATTACATTCAGAGGACAAAGAAATATTTCTACATATTGCTTGTTTCTTTAAAGGGGAGAAGGAAAATTATGTTAAACGAATACTGGATGCTTGTGGATTACACCCTCACATTGGAATTCAAAATATGATTGAGAGATCACTCATAACTATTAGAAACCAGGAAATTCATATGCACGAAATGGTACAAGATTTGGGGAAGAAAATTGTTCGGCAACAATTTCCCGAAGAACCAGGATCGTGGAGTAGATTGTGGCTTTATCAGCATTTTCATCATGTCTTGATGTCAGAAATGGGAACGAACAAGGTTAAAGCCATAGTTCTAGATCAAAATGAGGATATTTCCGAGTACCCTCAGTTGAGGGCTGAAGGATTGTCAATAATGAGGGGCCTTATAATTCTTATATTACATCATCAGAACTTTTCAGGAAGCCTCCATTTTCTTTCTAACAACTTGCAGTATCTTCTGTGGCATGGTTATCCTTTTGCTTCTTTGCCTTCAAACTTTGAGCCATTTCGTCTTGTTGAATTGAATATGCCTTATAGTAGCATCCAACGACTATGGGAAGGCCGCAAGGATCTCCCATTTTTGAAAAGGATGGATCTGAGCAACTCCAAGTATCTCACGGAGACCCCCAATTTTGAAGGAAGCAGAAGACTTGAGAGGCTAGATCTTACAGGATGCACAAACCTATTGCAGGTCCATCCATCAATTGGACTTCTTACAAAACTTGCTTTCTTGAGTTTTGAAAGCTGTAGCAGTCTGGTCAGCCTGGACCTTGGCAGTCTTTGTGTGTTATATTCTCTAGCTGTTCTACACCTCTCCGGCTGCACAAAACTTGAAAGCACACCTAATTTTACAGGGGTCGAAAATCTTGAATACCTTGATATTGATCAATGTGTGAGTTTATCCACAGTTGATCAATCTATTGGTGTTCTTACAAGGCTAGAATTCTTGAGTTTGAGAGACTGCTTAAATCTTACCAATATACCTCTAAGTGTTAATAATATGGAATCTCTTCTAACTCTAGATTTTTGCGGCTGCTTAAAACTTAAGCATCTGCCCCTGGGATTGCCATCATTGTCTCCTTTCACTCTGCAATCTTTGATATTTTTAGACTTAGGCTTTTGCAGCCTGAGTGAGGTCCCTCATGCTCTTGGAGAAATTGAGTGTTTAGAAAGGCTAAATCTGGAGGGAAATAACTTCGTCTCACTTCCATCTTCCCTGAGGTGGCTTTCCAGTCTTGCTTATTTAAACTTAGCGCATTGCAGCAAGCTTGAATTTTTATCTGAGCTCCAATTGTGTGACATTGCCTCAGAAGGGGGAAGATATTTTAGAACACTATCCGGATCTCATAATCATAGGTCAGGATTATATATTTTCAACTGTCCCACCTTAGCGATTACAGGTCTAAACTTAGCACTTTTGTGGTTAGAAAGGCTAGTTAAGAATCCTTGTCACTTCCGTTGTGGCTTTGACATTGTTGTTCCTGCGAACAGAATTCCACTGTGGTGTGCTGATAAATATAAGAGAGGTTTTAGAGTAGGGAAAGTGGGCAATGTTGATGAGCCTGACAATTGGCTTGGCTTTGCCTTCTGTGTAGCATTTAAGGAAAACTATTTTGGAACAGTGGCTAGTTGTTCAAATGATTCATCTTACTCGCAGCTGCGATGTCCTTTGTATCTTTCTTTTGAAAGTGAACACACGGAAGAAACCTTCGACATGCCACTTCGGTTCGACCTGAACAAAGCTGATGACTCAAATTCATCACACCTCTGGCTAATATATATTTCTAGGCCACACTGCCATTTTGTGAAAACAGGAGCACATGTCACATTTAAAGCTCACCCAGGTTTGGAGATAATAGAATGGGGGTTTAGCATGGTATTGGAGAATTGTATCTTCCATTCACCAATTGAATTTGAAGTTCATTATCCCTTGGATTATGTACATGAAAGTAGCAGCAGCAGCTCTGGGTCTAAAATCCAGATTCCTCTCAATTGGTTACCTAGTGAAAGCAGCAGCAGCAGCTCTGGGTCTAAATTCCATGTTCCCTATAATTGGTATGTTACTGAGGAAGAGGAGAGCGAGAATTTGGAAGTGAGTGCGGAAAAAAAAACATCTACTATCAAATATGGGATTTAG 3573 0.4069 MDSRSKYSDMLLSWGSWLLRPFWSLVSRRHSSHHLGPLAQGGSTASSSTTVFSNGARRYKYDVFISFRGSDTRNTFVDHLYAHLVRKGIFVFKDDKKLQKGESISAQLLQAIRNSRVSIVVFSKNYAESRWCLDEMAAIAECCEDFKQTVFPVFYDVDPSPVRNQNGVYENAFVFHMLRFKHDADRVDRWKRAMRSLAGSAGWDVRNKPEFREIENIVEAVIEALGRKFSGFADDLIGIQPRVETLENLLKLNSEYYDCQVIGIWGMGGIGKTTLATVLYDRISHLFEARCFVENVSKVYRDGGVTAVQKQVLRQTVDEMNLETYSPSEISGIVRDRLRSLKVLVVLDNVDQLVQLQEFAVNPGLFQKGSRMIITTRDEHILKVYGAHIVYEVPLMNNNDARELFYRKGFKSDNLSSRCAELVPEVLKYAQGLPLAIRVTGSFLCTRNAMQWRDALDRLKNNPDNKVMDVLQISFEGLHSEDKEIFLHIACFFKGEKENYVKRILDACGLHPHIGIQNMIERSLITIRNQEIHMHEMVQDLGKKIVRQQFPEEPGSWSRLWLYQHFHHVLMSEMGTNKVKAIVLDQNEDISEYPQLRAEGLSIMRGLIILILHHQNFSGSLHFLSNNLQYLLWHGYPFASLPSNFEPFRLVELNMPYSSIQRLWEGRKDLPFLKRMDLSNSKYLTETPNFEGSRRLERLDLTGCTNLLQVHPSIGLLTKLAFLSFESCSSLVSLDLGSLCVLYSLAVLHLSGCTKLESTPNFTGVENLEYLDIDQCVSLSTVDQSIGVLTRLEFLSLRDCLNLTNIPLSVNNMESLLTLDFCGCLKLKHLPLGLPSLSPFTLQSLIFLDLGFCSLSEVPHALGEIECLERLNLEGNNFVSLPSSLRWLSSLAYLNLAHCSKLEFLSELQLCDIASEGGRYFRTLSGSHNHRSGLYIFNCPTLAITGLNLALLWLERLVKNPCHFRCGFDIVVPANRIPLWCADKYKRGFRVGKVGNVDEPDNWLGFAFCVAFKENYFGTVASCSNDSSYSQLRCPLYLSFESEHTEETFDMPLRFDLNKADDSNSSHLWLIYISRPHCHFVKTGAHVTFKAHPGLEIIEWGFSMVLENCIFHSPIEFEVHYPLDYVHESSSSSSGSKIQIPLNWLPSESSSSSSGSKFHVPYNWYVTEEEESENLEVSAEKKTSTIKYGI* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3079 1190 Gene3D - 396 479 IPR042197 -
Lja3g3079 1190 Gene3D Ribonuclease Inhibitor 546 729 IPR032675 -
Lja3g3079 1190 Gene3D Ribonuclease Inhibitor 738 838 IPR032675 -
Lja3g3079 1190 Gene3D Ribonuclease Inhibitor 839 957 IPR032675 -
Lja3g3079 1190 PRINTS Disease resistance protein signature 261 276 - -
Lja3g3079 1190 PRINTS Disease resistance protein signature 337 351 - -
Lja3g3079 1190 PRINTS Disease resistance protein signature 430 444 - -
Lja3g3079 1190 PRINTS Disease resistance protein signature 668 684 - -
Lja3g3079 1190 Pfam TIR domain 60 225 IPR000157 GO:0007165
Lja3g3079 1190 SUPERFAMILY L domain-like 547 937 - -
Lja3g3079 1190 SMART till_3 60 200 IPR000157 GO:0007165
Lja3g3079 1190 Gene3D - 55 230 IPR035897 -
Lja3g3079 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 489 IPR027417 -
Lja3g3079 1190 SUPERFAMILY Toll/Interleukin receptor TIR domain 56 203 IPR035897 -
Lja3g3079 1190 ProSiteProfiles TIR domain profile. 59 225 IPR000157 GO:0007165
Lja3g3079 1190 Pfam NB-ARC domain 251 471 IPR002182 GO:0043531
Lja3g3079 1190 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 55 672 IPR044974 GO:0006952
Lja3g3079 1190 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 671 907 IPR044974 GO:0006952
Lja3g3079 1190 Gene3D - 233 389 IPR027417 -
Lja3g3079 1190 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 55 672 - -
Lja3g3079 1190 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 671 907 - -
Lja3g3079 1190 Pfam Leucine Rich Repeat 650 666 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3079 Lja-Chr3 58315710 58325303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3079 742 903 WRKY Transcription Factor Family AT4G12020 35.583 2.12e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3079 - - mtr:MTR_2g083520 1512.28