Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja3g3076 | ATGTACCACCGTAGATTCAAAATCAACACCCGGCAATTATACGCCTCTGACAGCCCAAATGACCTTGAGCCCGAGCCCATCTCTGAGCCCGGGCCCGCTTCACCTTCTTCCGGTGAAGACATAAAAACTGAAGCACCATCTCCCAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACTTTACCAATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGACATATCCACCGTCCGATTCATGGGCCTGGAGAAAGTACGGTCAGAAGCCCATCAAAGGTTCCCCTTATCCCAGGGGATACTACCGATGCAGCAGTTCAAAGGGATGCCCCGCAAGGAAGCAAGTTGAAAGAAGCCGCGTGGACCCCACAAAGCTCATGGTCACCTACTCCTACGAACACAACCACTCCCTCCCCGTTCCCAAATCACATTCCTCCGCCGCCTCCGCCACCGCAACCACCTCCAGCGACGGCGCTGCTGACACTCCCGCCACGCCTACCGAGTCCACCGCCATGTTGCCGCCGGAGGAGGATCTGACGGTTTTCGCCACGCATCCCGATCTGGAATTCACCGGCGACTCGGCGGTTCTGCTCGGCCACCACCACCACCACGCAGATTTCGGGTGGTTCGACGACGTGGCCTCCACCGGCGTTCTTGAAAGTCCGATCTGCGACGAGGTGGAGGATGTGATGCTAACGATGAGGGAGGAAGACGAGTCGCTGTTTGCCGATCTCGGCGAGTTGCCGGAGTGTTCGGCGGTTTTCCGGCGAAGGAATATTCTGAGCACCAGCACGATACAGTGTGATGGCATCACAGGATAA | 822 | 0.5681 | MYHRRFKINTRQLYASDSPNDLEPEPISEPGPASPSSGEDIKTEAPSPKKRREMKKRVVTLPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLMVTYSYEHNHSLPVPKSHSSAASATATTSSDGAADTPATPTESTAMLPPEEDLTVFATHPDLEFTGDSAVLLGHHHHHADFGWFDDVASTGVLESPICDEVEDVMLTMREEDESLFADLGELPECSAVFRRRNILSTSTIQCDGITG* | 274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja3g3076 | 273 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
Lja3g3076 | 273 | Pfam | WRKY DNA -binding domain | 80 | 136 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja3g3076 | 273 | SMART | WRKY_cls | 78 | 138 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja3g3076 | 273 | Gene3D | WRKY domain | 66 | 140 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja3g3076 | 273 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 27 | 263 | IPR044810 | GO:0003700 | |
Lja3g3076 | 273 | ProSiteProfiles | WRKY domain profile. | 79 | 139 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja3g3076 | 273 | SUPERFAMILY | WRKY DNA-binding domain | 74 | 139 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja3g3076 | 273 | MobiDBLite | consensus disorder prediction | 137 | 174 | - | - | |
Lja3g3076 | 273 | PANTHER | OS01G0750100 PROTEIN | 27 | 263 | - | - | |
Lja3g3076 | 273 | MobiDBLite | consensus disorder prediction | 137 | 169 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja3g3076 | Lja-Chr3 | 58155090 | 58158183 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja3g3076 | 3 | 260 | WRKY Transcription Factor Family | AT3G58710 | 48.864 | 5.73e-74 | 225 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lja3g3076 | WRKY | 2.1e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja3g3076 | - | - | gmx:100170680 | 401.749 |