Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3071 ATGGCTCCCCATTCCCATTTCTTTGCTGCACTCTCCATTCTTCTTTCTCTCCTAGCCTGTTCTGCTAATGCACAACTTACTCCCACCTTCTATGACAGATCTTGTCCCAAGCTTCAAACCATTGTGCGCAATGCAATGGTCCAAACTATCAAAAAAGAAGCTAGGATGGGAGCCTCTATCCTTCGCCTGTTCTTCCATGACTGCTTTGTAAATGGTTGTGATGGATCAATCTTATTGGATGACATTGGTACTACCTTTGTGGGAGAAAAGAATGCAGCACCAAATAAAAATTCAGCTAGGGGCTTTGAAGTGATTGACACCATTAAAACCAACGTAGAAGCTTCTTGCAACAATACTGTCTCATGTGCAGATATTCTAGCACTTGCCACAAGAGATGGAATAAATCTGCTTGGAGGACCAACATGGCAAGTACCACTTGGCCGAAGAGATGCAAGAACAGCAAGCCAGAGCAAAGCCAACACTGAAATCCCTTCACCATCCTCCGACCTCTCCACCCTCATCTCCATGTTCAGCGCCAAGGGTCTATCAGCCCGTGACCTCACCGTGCTCTCCGGTGGCCACACCATAGGCCAAGCAGAATGCCAGTTTTTCCGATCACGTGTCAACAACGAGACCAACATTGATGCCGCCTTCGCAGCCTCCAGAAAAACCAACTGCCCTGCCTCCGGCGGCGGAGACACCAATTTAGCCCCTCTTGAGACCCTCACGCCGACCAAATTCGAGAACAACTACTACCGAGACCTCGTGGCTCGCAAAGGACTTCTCCACTCTGATCAGGTGCTTTTCAATGGTGGATCTCAGGATGCTCTGGTTAAGAGTTATGCTGCCAATAATGCTGCTTTTTTTAGAGATTTTGCTGCTGCTATGGTGAAGATGAGTAAAATTAGTCCTCTCACTGGGACTAATGGAGAAATCAGAAAGAATTGCAGGGTTGTCAATTAA 963 0.4725 MAPHSHFFAALSILLSLLACSANAQLTPTFYDRSCPKLQTIVRNAMVQTIKKEARMGASILRLFFHDCFVNGCDGSILLDDIGTTFVGEKNAAPNKNSARGFEVIDTIKTNVEASCNNTVSCADILALATRDGINLLGGPTWQVPLGRRDARTASQSKANTEIPSPSSDLSTLISMFSAKGLSARDLTVLSGGHTIGQAECQFFRSRVNNETNIDAAFAASRKTNCPASGGGDTNLAPLETLTPTKFENNYYRDLVARKGLLHSDQVLFNGGSQDALVKSYAANNAAFFRDFAAAMVKMSKISPLTGTNGEIRKNCRVVN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3071 320 PANTHER PEROXIDASE 72-RELATED 15 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Lja3g3071 320 Gene3D Peroxidase, domain 2 164 299 - -
Lja3g3071 320 Gene3D - 29 320 - -
Lja3g3071 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Lja3g3071 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
Lja3g3071 320 PANTHER PEROXIDASE 15 320 - -
Lja3g3071 320 Pfam Peroxidase 42 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g3071 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3071 Lja-Chr3 57854832 57859209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3071 24 316 Peroxidase AT5G05340 63.605 6.16e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3071 K00430 - gmx:100803503 481.87