Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3064 ATGGAGGAGACACGAGAAGATGCAGGGCCGGCAGAGCAAGGGCCATCTAATGCTAATAAATCATGGTGGCCTTCAGATTTCATTGAAAAATTTGGATCAGTTTCTTTGGATTGTCAAGATGAAACCTTAAATGATAAAGAATCTCCTAGACATTCTGACAAATATGTTTTATCACCTCAGAAAGCCTCACAAATTCTCTGGCTCACTGGAATGCTTTCAGAACCAATACCCAATGGTTTTTATTCAGTCCTTCCGGAGACAAGACTCAAGGAACGTTTTGATAGTATTCCTACCTTGGATGAGCTTCATGCTCTGGGTGGAGAGGGTTTAAGGGCTGATGTCATTCTTGTGGATTTAGAGAAAGATAAGAAGCTATCCATGGTGAAGCAACTGATTGTGACATTAGTCAAAGGATTAAACTCAAACCCAGCTGCAATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGACCCAATGTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAACGCCTCACATGTTTGAGAATCGACTTGTCCAGATGTTGGGGCAAATAAAGCATGGTTCATGCCGTCCTCGGGCTATCTTATTCAAAGTATTAGCTGATACTGTAGGGCTTGAAAGTAGGCTCATGGTGGGCTTGCCAAATGAAGGGGCTATTGGATGTGGAGATTCACACAAGCATATGTCTGTGACAGTTGTGTTAAATTCGGTGGAAATGCTGGTTGACTTAATGCGATTTCCGGGCCAATTGTTACCAAGATCAACCAAGGCAGTTCTTATGACTCATATTTCCGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCCTGTGATTCACCATTAGAACCAAACAGTCCTTTATTTGGAGTTCCGGAGAGTGCTGAGAAGGAGGAAAACCTCCAATTCCATAAAAAATTTGAAATGTCTTCAAATGCGTCAGGCCTTTCCTTGAGAAACATGATGTTACGATCAAATAGTTGTTTGAGTTTATCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAATCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATATCGAGCCCGTGCACGGTCCTTACTTAGTGGTGATAGGAAAGCTTTCAGAGAATTTGCTGATGACCAGGCCACATCAAGATCCAGCTATAGGTCAGATGGTGCGTCCTCATTAGAACCTCGTAGGATACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAAAATCGTCTTCTGAGAGAACAAGGGGATGATAACTCATTCTCCCATTCTCCAAACAACAGAAGTACTGATGCAAATCTTCAGAAAAATGTGCCAAATTCTCATCCTGATGGTCATAATGAAAGGTTGGCCTTATATTCTCATCAGTGTGACCAAGGAACTTCGCAAAAAGCAATGTCGTTGCCGTCTTCGCCACAGAACTATAGAGGTCAAGCTTCTGAGAGAAGTGGGCCTTCAAGATATGGAGTGAATGATGAGACAGAATCGACTTGGAATAAAGTACTTGAATCCCCGATGTTCAATAATAGACCCCTACTAGCATATGAGGAATGGTATATTGATTTCTCAGAGATAACTGTTGGAACTCGTGTAGGGATTGGCTTCTTTGGAGAAGTCTTCCGTGGTGTATGGAACGGCACAGATGTTGCTATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTCTGCAATGAGATATCTATTCTGAGCCGACTCCGACATCCTAATGTTATCTTATTTCTTGGTGCATGCACGAAGCCTCCACGTTTGTCAATGGTCACAGAATATATGGAGATGGGATCATTGTATTACTTGATACATTTGAGTGGTCAAAAGAAAAAGCTCAGTTGGCGGAGGAGACTAAGGATGCTGCGTGACATATGCAAGGGATTGATGTGCATACACCGCATGAAGATTGTTCACCGTGATGTGAAAAGTGCAAATTGTCTGGTGAATAAGCATTGGACAGTGAAAATCTGTGACTTTGGGCTTTCAAGAATAATGACAGATTCTAACATGAGAGATTGTTCGTCAGCTGGAACTCCAGAATGGATGGCTCCTGAACTCATCCGAAATGAACCTTTCTCTGAAAAATGTGATATCTTTAGCTTTGGGGTGATAATGTGGGAGCTCTGTACCCTGAACAGACCATGGGAAGGTGTACCACCTGAAAGGGTGGTCTATTCTGTTGCTAATGAAGGTTCCAGATTAGAGATTCCTGAAGGCCCGCTAGGCAGGCTGATTTCAGACTGTTGGGTAGAATCACATGAGCGGCCGAGTTGTGATGAGATTCTTTCTCGTTTGGTGGACATCGAACACTCCTTGTGCTGA 2442 0.4267 MEETREDAGPAEQGPSNANKSWWPSDFIEKFGSVSLDCQDETLNDKESPRHSDKYVLSPQKASQILWLTGMLSEPIPNGFYSVLPETRLKERFDSIPTLDELHALGGEGLRADVILVDLEKDKKLSMVKQLIVTLVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDETPHMFENRLVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNEGAIGCGDSHKHMSVTVVLNSVEMLVDLMRFPGQLLPRSTKAVLMTHISAAGESDSAENDSCDSPLEPNSPLFGVPESAEKEENLQFHKKFEMSSNASGLSLRNMMLRSNSCLSLSHSEPNIATAFGRRNRRKVIAEQRTASSSPEHPSYRARARSLLSGDRKAFREFADDQATSRSSYRSDGASSLEPRRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDDNSFSHSPNNRSTDANLQKNVPNSHPDGHNERLALYSHQCDQGTSQKAMSLPSSPQNYRGQASERSGPSRYGVNDETESTWNKVLESPMFNNRPLLAYEEWYIDFSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLRMLRDICKGLMCIHRMKIVHRDVKSANCLVNKHWTVKICDFGLSRIMTDSNMRDCSSAGTPEWMAPELIRNEPFSEKCDIFSFGVIMWELCTLNRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISDCWVESHERPSCDEILSRLVDIEHSLC* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3064 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Lja3g3064 813 Pfam Protein tyrosine and serine/threonine kinase 558 805 IPR001245 GO:0004672|GO:0006468
Lja3g3064 813 SUPERFAMILY Protein kinase-like (PK-like) 532 805 IPR011009 -
Lja3g3064 813 MobiDBLite consensus disorder prediction 388 409 - -
Lja3g3064 813 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 28 811 - -
Lja3g3064 813 Pfam Ethylene-responsive protein kinase Le-CTR1 60 255 - -
Lja3g3064 813 CDD STKc_MAP3K-like 563 805 - -
Lja3g3064 813 ProSiteProfiles Protein kinase domain profile. 557 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3064 813 ProSitePatterns Protein kinases ATP-binding region signature. 563 584 IPR017441 GO:0005524
Lja3g3064 813 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 28 811 - -
Lja3g3064 813 MobiDBLite consensus disorder prediction 274 295 - -
Lja3g3064 813 MobiDBLite consensus disorder prediction 450 473 - -
Lja3g3064 813 MobiDBLite consensus disorder prediction 442 480 - -
Lja3g3064 813 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g3064 813 Gene3D Phosphorylase Kinase; domain 1 551 635 - -
Lja3g3064 813 Gene3D Transferase(Phosphotransferase) domain 1 636 812 - -
Lja3g3064 813 MobiDBLite consensus disorder prediction 493 524 - -
Lja3g3064 813 SMART serkin_6 557 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3064 Lja-Chr3 57656034 57683209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3064 1 813 MAP Kinase Kinase Kinase AT3G58640 70.460 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lja3g3064 PK_Tyr_Ser-Thr 3.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3064 - - aprc:113853840 1427.54