Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3051 ATGACTCAGTGTAGCGACGACCCTGAAATCAATAATAACATCATAATACAGGAGGGACGTAAGGATAGCTTAATCAGAACTTGCCCCACATGTGGTCATCATATCAAATGCCAAGATCAGGGTGGTGGAATTCATGACTTACCTGGATTGCCTGCGGGAGTGAAGTTTGATCCCACAGATCATGAGATTCTTGAACATTTGGAAGCGAAGGTGCGGTCTGATATTCATAAGCTTCATCCACTAATTGATGAGTTCATACCTACTCTTGAAGGTGAAAATGGAATCTGCTACACTCATCCGGAGAAGTTGCCAGGAGTGAGCAAAGATGGCCTGATCCGTCATTTCTTTCACCGGCCTTCCAAGGCATACACAACAGGAACAAGGAAAAGGAGAAAGGTGCACTCTGATGACGAAGACGGCGGCGAGACCCGTTGGCACAAAACCGGTAAAACTAGACCAATCTACAACAATGCCGAGTTGAAAGGTTACAAGAAAATCCTGGTGCTTTACACAAACTACGGAAAGCAAAGAAAGCCAGAAAAAACAAACTGGGTCATGCACCAGTACCACCTAGGCACTGATGAAGAAGAGAAGGAAGGGGAGTTAGTCGTCTCCAAAGTTTTCTACCAAACACAACCTCGACAATGTGGGGCTTCTTTAGTGATCAAAGACCATATTAAGAAAGGTCAAAGCATGCATCATGAGGTGAATATCAATAACAAAAGAAATAATGGGTTAGTTGAGTACTATCATTCAAATTTCATATCATTTGATCAAGGGAGCCAACAACATAGATCCCATTTTCCGGTCCATGATGGTCCTTTCATTCCTTGA 834 0.4317 MTQCSDDPEINNNIIIQEGRKDSLIRTCPTCGHHIKCQDQGGGIHDLPGLPAGVKFDPTDHEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDDEDGGETRWHKTGKTRPIYNNAELKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGTDEEEKEGELVVSKVFYQTQPRQCGASLVIKDHIKKGQSMHHEVNINNKRNNGLVEYYHSNFISFDQGSQQHRSHFPVHDGPFIP* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3051 277 SUPERFAMILY NAC domain 45 210 IPR036093 GO:0003677|GO:0006355
Lja3g3051 277 Pfam No apical meristem (NAM) protein 51 191 IPR003441 GO:0003677|GO:0006355
Lja3g3051 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 273 IPR044799 GO:0003700
Lja3g3051 277 MobiDBLite consensus disorder prediction 129 149 - -
Lja3g3051 277 ProSiteProfiles NAC domain profile. 50 210 IPR003441 GO:0003677|GO:0006355
Lja3g3051 277 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 273 - -
Lja3g3051 277 Gene3D NAC domain 59 214 IPR036093 GO:0003677|GO:0006355
Lja3g3051 277 MobiDBLite consensus disorder prediction 123 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3051 Lja-Chr3 57171775 57174465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3051 1 277 NAC Transcription Factor Family AT4G28500 60.000 7.95e-121 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lja3g3051 NAM 4.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3051 - - gmx:100795895 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3051 3 57171775 57174465 Lja3g3051 3 57171775 57174465 ECH