Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3034 ATGGTGCTGTTTGTGTTCTTTTGGTGTAAATTTTGCCTCAAGGAAGGTATGATGGGAAAGAATTCCAAGGGAAAATGTGGATCGCCTTCTCGTCAATCCATGAAAGAGAAGGAGAAACACTTGGTGGATAAGATACAAGGGATTTTCACCAATCTTCAGTATGCAAGAAAGGAGAACAGGGCTAATGACATTGTGATCTGTGAGGAGCAGATGCATCAGTTTCTGCGGGAGTGGAAGGCGGAACTGGAGTCTCCAGCCACCTCCTTAGCTAATGGAAGCTTTGATTCGTTTACCGGGGAACTAGCCCAACTATTGCAAGAAATTGAGGAGCAAGATGATGCAACAAGTCCATTAACAAAACCTGTGCCATTGAAGACTGAGCCCCATCCAAATAACGTTAGTGATAGCAGTTATCCATTTTTTGAGGAGAAGTGTTTTAATGATAACCAACCACTATATCATACTTTTGAAGGCTCTTCTTCAACTCTCTACAACAATGCCTTTAATAACTCAGATATAATTCAGTTGGACTATCATCAACTCAGCTTGAATCACAATTTGGATCACAACACAGTAGGCCACAACTCGGATTTAATTGGTCAATTTGATCTAAGCCAGGAACTCAGGCACCACACAGAAATGAAAAACTCTGAGTCAACTCAAATTATTTTCGATGAAGGCTTTGATTGTAGCCAATTTTTCGGAGATGATGATCCTGTGCAGTGTGGAGACAATATTATACCTAACATTCTTCCAAGTATCCGCCCTCCACCTTCTGCATTTTTAGCTCCAAAATGTGCACTATGGGATTGTTTCAGACCTGCTCAAAGGTTAGAATGGTGCCAGGACTACTGTAGCAGTCACCATGAGCTTGTGGCAAATAAAGAGGGCCTTCCTGGCACGACTCCGATCGTGCGACCTCGAGGCATTGACATCAAAGATGGTCCTTTGTTTGCTTCTGTTCTAGCAAAGACACAGGGAAAGGAAGTGGGCATCCCTAAATGTGAAGGTGCTGCTTCCACTAAATCCCCCTGGAATGCTCCTGAGTTCTTTGATCTTTCTCTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTCTTCTTTGACAAACCAAGAAGGGCATTTGAAAGTGGAAATAGAAAGCAGAGATCGCTCCCAGATTACAGTGGGCGTGGTTGGCATGAGTCAAGGAAGCAGGTGATGAAGGAACATGGGGGACAAAAGAGGTCCTACTACATGGATCCCCAGCCTCTTAGTTATCTCGAGTGGCATTTGTTCGAGTACGAAATCAATAACCATGATGGCTGCGCATTATACAGACTAGAGCTAAAGCTCGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACGAGGGAATCTCTTACTGATTTACAGAACAAGATGGGGAAACTAACTGCCGCCGTTTCATCATCTGATGATGCACTCCCTGACAAGGGAAACACAACACCCAAGTCTAAGAATGTTGGGTGTCCTGAAAATTAA 1500 0.4347 MVLFVFFWCKFCLKEGMMGKNSKGKCGSPSRQSMKEKEKHLVDKIQGIFTNLQYARKENRANDIVICEEQMHQFLREWKAELESPATSLANGSFDSFTGELAQLLQEIEEQDDATSPLTKPVPLKTEPHPNNVSDSSYPFFEEKCFNDNQPLYHTFEGSSSTLYNNAFNNSDIIQLDYHQLSLNHNLDHNTVGHNSDLIGQFDLSQELRHHTEMKNSESTQIIFDEGFDCSQFFGDDDPVQCGDNIIPNILPSIRPPPSAFLAPKCALWDCFRPAQRLEWCQDYCSSHHELVANKEGLPGTTPIVRPRGIDIKDGPLFASVLAKTQGKEVGIPKCEGAASTKSPWNAPEFFDLSLLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLFEYEINNHDGCALYRLELKLVDKKKSPKGKVTRESLTDLQNKMGKLTAAVSSSDDALPDKGNTTPKSKNVGCPEN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3034 499 MobiDBLite consensus disorder prediction 386 407 - -
Lja3g3034 499 MobiDBLite consensus disorder prediction 377 407 - -
Lja3g3034 499 MobiDBLite consensus disorder prediction 110 131 - -
Lja3g3034 499 MobiDBLite consensus disorder prediction 480 499 - -
Lja3g3034 499 PANTHER TRANSCRIPTION FACTOR VOZ2 18 492 - -
Lja3g3034 499 PANTHER TRANSCRIPTION FACTOR VOZ1 18 492 IPR039277 GO:0006355|GO:0048578
Lja3g3034 499 MobiDBLite consensus disorder prediction 467 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3034 Lja-Chr3 56644998 56648752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3034 17 472 VOZ-9 Transcription Factor Family AT1G28520 51.739 1.41e-155 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lja3g3034 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3034 - - gmx:100808629 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3034 3 56644998 56648752 Lja3g3034 3 56644998 56648752 ECH