Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3025 ATGGGATCCGAAGCATTCCAAGCAATTATGATCTACCGCCATCTTCTCAAGGCGGTGAAGAAGCATATTGGAAAGGAAGAGAGCAAGAGACATTTTTCAGAATTTATAACCAACGAGTTCCGTAAGAACGTTAATCTCACAGATGTTGTGGCTCTTCAACACAAAATAAAGCTTGCCCATGATTATACTCTTTTGCTTAATTCAGTGCACCATCAAAAGGAGGGTAACAACTCTACCATGTCTTCACTATGTACCGCCATTGATCTCAGCCTCGATTGCTCGTATTCAGGATGGAGTAGTCATCTACGCTGTATACAAACATTCCATTTCATAGTAAAAGGAAGTGAAAGCAGCCTTCAAATTGACAGTAATGACAACCTTTTACATGGTAAAGTTCATCTAAATGGCATGGGTCATCTGTTGTGGGTTAAAGCATCAGATGAGTTTCCAGGGACCTCTATCATGTATGTTAGGGAGGCTATCTGCTCTGATATGTTCGTCAAAGAATTGAGTTTGATTGACACTTCAACGCGGAATGATATACCTCTTAGGGTACTTTTTGGGTTATCAAAGTTTCGTGGTTTCAGAACTTGGTTTGAAAGGTTTGGATATCATGTTTCTCAGGGATGTTTTGGCACGACCATAATAAGGTATGAGAATGCAGTGGTCATTGATTTTCCGGCTCTGAAGCTCAGGTCTTTACTAGCTGAATTTGGTGTAGCTGAAGCGACATTGACGGATGAAATAATTCTCAACTATTACGAGGATTATGACGGCGATGAACCTTTTGAGGAACTTCTACTTATCCATTTGATCAATGATAGGAAATTTGATCAAATTAAATATATCTTGGACGCAATGAAGTGTATCGAGAATTCGTTGTTCATTGGCCCACTCCATGACATATTCAATGGAAATATGTTAAAAAAAAATTGTGGTTCATAA 945 0.3894 MGSEAFQAIMIYRHLLKAVKKHIGKEESKRHFSEFITNEFRKNVNLTDVVALQHKIKLAHDYTLLLNSVHHQKEGNNSTMSSLCTAIDLSLDCSYSGWSSHLRCIQTFHFIVKGSESSLQIDSNDNLLHGKVHLNGMGHLLWVKASDEFPGTSIMYVREAICSDMFVKELSLIDTSTRNDIPLRVLFGLSKFRGFRTWFERFGYHVSQGCFGTTIIRYENAVVIDFPALKLRSLLAEFGVAEATLTDEIILNYYEDYDGDEPFEELLLIHLINDRKFDQIKYILDAMKCIENSLFIGPLHDIFNGNMLKKNCGS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3025 314 Pfam Complex 1 protein (LYR family) 12 62 IPR008011 -
Lja3g3025 314 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 27 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3025 Lja-Chr3 56468649 56472425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3025 93 222 PHD Transcription Factor Family AT5G22260 26.797 9.37e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3025 - - nnu:104606362 119.012