Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3023 ATGGACTCGCATAGCTTCCTATGTTTCCACTCCGCATGTCTTCTTCTCTTCGCTTCCACCGCAGGTTGTCTTTCACACCCTTCCCTCCTTGGCGTTCACCCTTTAGATGAGAAATATTATGGCTCTGAGGTGATCAAGTGCAAGGATGGATCAAAATCCTTCTCAAGAGACCGCATCAATGACAATTTCTGTGACTGTCCTGATGGCACTGATGAACCTGGAACTTCAGCTTGCCCCAAAGGAAAGTTTTATTGCAAAAACCTAGGAAGCAAGCCACAGTTCATATTTTCTTCTCATGTTAATGATAATTTTTGCGATTGTTGTGATGGGAGTGATGAATATGATGGAACTATTCATTGCCCTAACACATGTGTCATGGGCGGGAATTCTGAGTACATGATTGGCAATTACAATAAGAAAGTAAGTGGTTTTGCTGAAAAAGAAACAAAAAATGGAGTGAAGTCAGGGGAATCCGTTCGTAACCTTACTGGTTTGAAGTTGGCTATTATTCTACAAGTGGTTCTGGTCATTTTTCTATTACTTCTCTGGAGTTTTCGCTTTACAAGATCTAGAAGGAGGCGCTACCGGTGA 591 0.4196 MDSHSFLCFHSACLLLFASTAGCLSHPSLLGVHPLDEKYYGSEVIKCKDGSKSFSRDRINDNFCDCPDGTDEPGTSACPKGKFYCKNLGSKPQFIFSSHVNDNFCDCCDGSDEYDGTIHCPNTCVMGGNSEYMIGNYNKKVSGFAEKETKNGVKSGESVRNLTGLKLAIILQVVLVIFLLLLWSFRFTRSRRRRYR* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3023 196 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 14 194 IPR039794 -
Lja3g3023 196 Pfam Glucosidase II beta subunit-like 26 127 IPR028146 -
Lja3g3023 196 PANTHER EXPRESSED PROTEIN 14 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3023 Lja-Chr3 56434096 56437931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3023 29 146 Calmodulin-binding Proteins AT5G56360 58.824 8.72e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3023 - - gmx:100306278 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3023 3 56434096 56437931 Lja3g3023 3 56434096 56437931 ECH