Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3020 ATGGCTCAATTGCCACCAAAGATTCCAAACATGCCACCAACTTGGTCAGATTTTTCTTCTAACCAAAAGAATATTATACCTTCCCTTAAAAACATGACACCAAATGCTGCAACCCAACATCATCATCATCATCATGGTCAGAGTCCTTCATGGGTGGATGAGTTCCTTGACTTCTCGTCGTCGAGGCGCGGGGCCCACCGGCGGTCGGTGAGCGACCCGGTGACCTTCGTGGAGATGATGCCGCCGGCAATGCTGGAGCATTGCCACCGGAAAGTTGGTAGTGGTGGCGGCGAGTTCGACCGGTTTGATGATGAGCAATTCTTGTCCATGTTCAGCGACGAGGTTTCTGGGAACCCGGTGATGCCGCCGCCACCGACGGTGTCCTGTTCTGACCCTTCCACGCCTTCGGATCACAATAGCATCAACGATGAGAAAGAAATGAAAGGAGAGAAAGAGGTAGAACAAGAAAAAGAGGAGCAACAGCAGCAATTGAAGCAGGAATCGGATGAGGATGAAAGCCAAATCCAATGCAAGCAGGAAGCTGCAGGAGCTACCAATGAAGATAACAATAATAATAATGATTCAAATGCAGCAACTTTATCCAGTGACAGAATCACTGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGGTCAAGAGTGAGGAAACTGCAATACATATCAGAGCTTGAGCGGAGTGTGACTTCATTACAGGCTGAAGTTTCAGTTCTGTCTCCACGGGTTGCATTTTTGGATCATCAGAGATTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATAGCAGCACTTGCACAAGACAAGATCTTCAAAGATGCTCATCAAGAAGCACTGAAGAGAGAGATAGACAGATTGAGGCAAGTGTATCACCAACAAAACATGAAGAAGATGGATAGTGCTACAGGGTCACAATCCCCATCCCCATCACCAAAACCAAGATGTGATACTCACACTGAAAAGGAGCATCTTATCAATGCTTGA 1020 0.4637 MAQLPPKIPNMPPTWSDFSSNQKNIIPSLKNMTPNAATQHHHHHHGQSPSWVDEFLDFSSSRRGAHRRSVSDPVTFVEMMPPAMLEHCHRKVGSGGGEFDRFDDEQFLSMFSDEVSGNPVMPPPPTVSCSDPSTPSDHNSINDEKEMKGEKEVEQEKEEQQQQLKQESDEDESQIQCKQEAAGATNEDNNNNNDSNAATLSSDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIDRLRQVYHQQNMKKMDSATGSQSPSPSPKPRCDTHTEKEHLINA* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3020 339 MobiDBLite consensus disorder prediction 301 339 - -
Lja3g3020 339 Pfam bZIP transcription factor 209 253 IPR004827 GO:0003700|GO:0006355
Lja3g3020 339 SMART brlzneu 205 269 IPR004827 GO:0003700|GO:0006355
Lja3g3020 339 MobiDBLite consensus disorder prediction 13 28 - -
Lja3g3020 339 MobiDBLite consensus disorder prediction 178 203 - -
Lja3g3020 339 MobiDBLite consensus disorder prediction 305 325 - -
Lja3g3020 339 SUPERFAMILY Leucine zipper domain 209 263 IPR046347 GO:0003700|GO:0006355
Lja3g3020 339 MobiDBLite consensus disorder prediction 1 28 - -
Lja3g3020 339 CDD bZIP_plant_RF2 210 260 IPR044759 GO:0003700|GO:0006355
Lja3g3020 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 207 259 IPR004827 GO:0003700|GO:0006355
Lja3g3020 339 MobiDBLite consensus disorder prediction 138 176 - -
Lja3g3020 339 PANTHER BASIC LEUCINE ZIPPER 34 1 336 - -
Lja3g3020 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 212 227 IPR004827 GO:0003700|GO:0006355
Lja3g3020 339 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 336 - -
Lja3g3020 339 Coils Coil 147 181 - -
Lja3g3020 339 MobiDBLite consensus disorder prediction 113 205 - -
Lja3g3020 339 Gene3D - 208 280 - -
Lja3g3020 339 Coils Coil 288 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3020 Lja-Chr3 56418188 56421440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3020 1 287 bZIP Transcription Factor Family AT3G58120 52.922 3.65e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g3020 bZIP_2 4.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3020 - - lang:109363232 412.149