Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3013 ATGTTGAATCTATCTAAATTTGGAATAATGCTCATCAAATGTTTGTGTTTTTGCCGCTCTAAGCATATCAGTTCCCCTCAGAGGCGCTATCCAACAGTAATAGAAGAGCTATGCCCTCAATTTTCTCTTGCTGATCTTAGGAAATCAACCAACAACTTTGATGACAATCAAATAGTTGGAGGTGGAGGCCTTGGAACAGTATACAAAGGTTGTCTAAACCACAATGGAACTAATGAGTGTGCAGTTGCAATCAAGCGAATTAACGCGATAACTGACCAAGAATTCAAAGAGTTCAAGAACGAAATCGAGTTGCTCTGCCAGCTTCGTCATCCTAATTTGGTCTCTTTAATAGGGTTTTATGACGGCAAAGATGAAAAGATTATTGTGTACGAGTACATGGCCAATGGAGCTCTCCATAATCTCCTACACGGTACGAAAAGAGAACGACTCTCGTGGAAGCTGAGGCTAAAGATATGCATAGGAGCAGCATGTGGACTACACTTCCTTCACTCAGGAGCCAAGCGCACCATATTTCACCGTGACATACGACCTTATAAAATTTTATTGGATGATAATATGGTGGCTAAACTATCAGACTTGCGGTTTTCCTTACAGGGACCTCTGTTTAAGTCAAAGCCAAAACCAAAGTCCATATTGAATGATAACTTTCTAGGTACACAAGGTTACATGGCCCCTGAGATTTTACAAAACAAGACAGTAACAGATAGGTGTGACGTTTACTCTTTTGGTGTAGTTCTCCTAGAAATGGTATGCAGTGACAATCTAGAACTTGTTAAGTGTCAACAGCAACCTATGGAGGCGAATATTGATTCAGAAATCAAAGGAAAAATTGCAGCAGAATGTTGGGAAGTTTATGTGGATGTCATAGAAAGATGCTTGAGGCTTGACCCAAATGAGCGACCATCAATGGGTGAAGTGGAGGTGCAACTTGAGCTTGCCTTGTCACTGCAGGAAGAAGCAGATATCAGAAACACCAATGGTGATCATTATACTTTATTATCTTCAACCATTATTGGTCCTTCACCAAAGACACATTTTAGCCAAAGATAA 1071 0.4034 MLNLSKFGIMLIKCLCFCRSKHISSPQRRYPTVIEELCPQFSLADLRKSTNNFDDNQIVGGGGLGTVYKGCLNHNGTNECAVAIKRINAITDQEFKEFKNEIELLCQLRHPNLVSLIGFYDGKDEKIIVYEYMANGALHNLLHGTKRERLSWKLRLKICIGAACGLHFLHSGAKRTIFHRDIRPYKILLDDNMVAKLSDLRFSLQGPLFKSKPKPKSILNDNFLGTQGYMAPEILQNKTVTDRCDVYSFGVVLLEMVCSDNLELVKCQQQPMEANIDSEIKGKIAAECWEVYVDVIERCLRLDPNERPSMGEVEVQLELALSLQEEADIRNTNGDHYTLLSSTIIGPSPKTHFSQR* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3013 356 PANTHER OS07G0166700 PROTEIN 25 340 IPR045272 GO:0004714|GO:0006468
Lja3g3013 356 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Lja3g3013 356 SUPERFAMILY Protein kinase-like (PK-like) 29 321 IPR011009 -
Lja3g3013 356 PANTHER TYROSINE KINASE FAMILY PROTEIN 25 340 - -
Lja3g3013 356 Gene3D Phosphorylase Kinase; domain 1 15 132 - -
Lja3g3013 356 ProSiteProfiles Protein kinase domain profile. 53 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g3013 356 Gene3D Transferase(Phosphotransferase) domain 1 133 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3013 Lja-Chr3 56183908 56186493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3013 40 351 Receptor kinase-like Gene Family AT1G30570 41.590 2.05e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja3g3013 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3013 - - gmx:100779112 444.121