Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2994 ATGGCGATGCTGCTAGTGCTACCTCACAGGCACACCCTCACTCTTCTTCTTCTTCTTCTTCTTCTATTCCTTCCACACACAACACTATCAGTATCAGTATCAGTATCAGATCTGGATTCCGAGCGAGCCGCATTGCTCGCCCTCCGTTCCACCGTCGGCGGTCGAACCCTTTTCTGGAACGCCACCAACACCAGCCCCTGCGATTGGGCCGGCGTCCAATGCCACCATGACCACGTCGTCGAGCTTCACCTCCCCGCCGTCGCTCTCTCCGGCCAACTACCCCTCGGAATATTTGGTAATCTCACCCACCTCCGCACCCTCAGCCTCCGTTTCAACGCCCTCACCGGCACCCTCCCTTCAGATCTCGCCTCCTGCCTTGACCTCCGCAACCTTTACTTGCAGGGCAACTTGTTCTCCGGCCAAATCCCACCCTTCCTCTTCCGCTTGCCCGAACTCGTCCGCCTCAATATGGCCTCCAACAACTTCTCCGGCGACTTCCCCGCCGCCTTTGACACCCTCGTCAAGCTCAAAACCCTCTTCCTCGATAACAACCAGCTTTCTGGTCCTATCCCGGAGTTGAACCACCTTGATCTGGACCAGTTCAATGTCTCCAACAACCTCCTTAACGGCTCTGTCCCCCTCAAGCTCCAGAGATTCACTTCAGATTCCTTTCTCGGAAATTCACTCTGTGGCAAACCCCTTTCTCTCTGCCCTGGAACCGACAATGCCGCCACCGGAGGAAACAAGTTGTCCGGCGGTGCCATTGCCGGGATCGTTATTGGATCCGTTGTGGGTCTTCTGTTGCTTGCTTTCCTTTTGATGTTTCTGTGCAGGAACAAGAGCAGCAACAAGACCAGCACCGTTGATGTGGCCACCGTCAAGCATCCTGAATCCGAAGTTCCTGCTGAGAAGTCGCTTCACGATGTGGAGAACGGCATTGGTAATGGTAATGGTAATGGTAATGGCAATGGGTACTCAGCTGCGGCGGCCACCATCAACAAGGTGGAAGCCAATGGTGTTGGGGCTAAGAAGCTGGTGTTTTTTGGCAATTCAGCTAGGGGGTTTGATCTGGAGGATTTGCTGAGAGCTTCGGCTGAGGTGTTGGGGAAAGGGACTTTCGGGACGGCATACAAGGCAGTTCTGGAGACTGGACTGGTGGTTGCTGTGAAAAGGTTGAAGGATGTGACAATTTCTGAGAAGGAGTTCAAGGACAAGATTGAAACCGTGGGGGCGATGGATCATCAGAGTTTGGTCCCTCTCAGGGCTTACTATTTCAGCAGGGATGAAAAGCTGCTTGTTTATGATTACATGCCAATGGGGAGCTTATCTGCGCTTTTGCATGGAAACAAAGGGGCGGGTAGGACACCACTGAATTGGGAAATCAGATCAGGGATTGCACTTGGAGCTGCTCGTGGCATTGAGTACTTGCATTCACAAGGGCCTAATGTTTCCCATGGGAATATAAAGGCATCTAATATCCTCCTAACCAAATCATATGAGGCCAAAGTATCTGATTTTGGCCTTGCACACCTTGTTGGCCCCTCATCTACCCCCAACCGTGTTGCTGGCTACCGTGCGCCTGAGGTAACTGATCCCCGCAAAGTATCTCAAAAGGCAGATGTGTACAGCTTTGGCGTGTTACTCTTGGAACTTCTAACTGGGAAAGCACCTACCCATGCTCTCCTAAATGAGGAAGGAGTAGACCTCCCAAGATGGGTTCAATCCGTGGTTAGGGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTATCAGAATGTTGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCTGTTGATTGTGCTGCCCCATACCCTGATAGGCGTCCTTCAATCGCTGAAGTAACTAGGAGCATAGAAGAGTTATGTCGGTCGAACTTGAAAGAGGACCAAGATCAAATCCAACATGATCAGATCAATGATATAAAATTGTGA 1962 0.5138 MAMLLVLPHRHTLTLLLLLLLLFLPHTTLSVSVSVSDLDSERAALLALRSTVGGRTLFWNATNTSPCDWAGVQCHHDHVVELHLPAVALSGQLPLGIFGNLTHLRTLSLRFNALTGTLPSDLASCLDLRNLYLQGNLFSGQIPPFLFRLPELVRLNMASNNFSGDFPAAFDTLVKLKTLFLDNNQLSGPIPELNHLDLDQFNVSNNLLNGSVPLKLQRFTSDSFLGNSLCGKPLSLCPGTDNAATGGNKLSGGAIAGIVIGSVVGLLLLAFLLMFLCRNKSSNKTSTVDVATVKHPESEVPAEKSLHDVENGIGNGNGNGNGNGYSAAAATINKVEANGVGAKKLVFFGNSARGFDLEDLLRASAEVLGKGTFGTAYKAVLETGLVVAVKRLKDVTISEKEFKDKIETVGAMDHQSLVPLRAYYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKASNILLTKSYEAKVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDRRPSIAEVTRSIEELCRSNLKEDQDQIQHDQINDIKL* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2994 653 PANTHER OS05G0588300 PROTEIN 12 651 - -
Lja3g2994 653 Gene3D Ribonuclease Inhibitor 40 148 IPR032675 -
Lja3g2994 653 Gene3D Ribonuclease Inhibitor 151 237 IPR032675 -
Lja3g2994 653 SUPERFAMILY Protein kinase-like (PK-like) 366 626 IPR011009 -
Lja3g2994 653 ProSiteProfiles Protein kinase domain profile. 362 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2994 653 Pfam Protein kinase domain 365 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2994 653 ProSiteProfiles Leucine-rich repeat profile. 175 197 IPR001611 GO:0005515
Lja3g2994 653 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 651 - -
Lja3g2994 653 SUPERFAMILY L domain-like 56 218 - -
Lja3g2994 653 CDD STKc_IRAK 368 631 - -
Lja3g2994 653 Gene3D Phosphorylase Kinase; domain 1 328 436 - -
Lja3g2994 653 Pfam Leucine rich repeat N-terminal domain 39 74 IPR013210 -
Lja3g2994 653 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lja3g2994 653 Gene3D Transferase(Phosphotransferase) domain 1 437 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2994 Lja-Chr3 55547607 55550591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2994 19 631 Receptor kinase-like Gene Family AT1G48480 60.458 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja3g2994 Pkinase 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2994 - - gmx:100818955 951.044