Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2949 ATGAGCAATTTCACGCCATTGCCAGGGCGTTGGAGGAGAGGTGTTAGAGCCTATGACGCTCACACCACCAACAATAGTGAATCCAATGAAGTGCCTGTGTTTTACAGATCTCACTCTACAAGGGTTAATGATGAGAGGAGTTCAGGTGTATCTGATCCACTGCAGTGGTGGGAACCACACAGCAGACAACAAACTAATGTTCCCAATGGGGACATAGGAAGAGGCTTCAACCCCAGGCTGAGACAGATTTTCCAGCAGCCACATTCAAGATCCACAGTCCAAACAAGCACACAAGCTCCCCGAGTGGAAGAAAACACCAAATCAACAGCTTTGAGCAAGCTTAAGAAAGTGATCTACAATAACAACCCCACCCCAAAGAGTTTAGCTAGGAGAGTGAGCTTATACTATAGAGATAATTCCAATGCTTTGAAAAAGAGAGTGAAAGAAAAGGATGAAGATGGCAAGAGATGTGATCCCAAAGAAGAAGTGATGCTCACTCCATGCAACCACATGTTTCATGAGGATTGCATAAGGGTGAACAACAACACTTCATCATCTTTCAGCAGGAATAATGATATTGTTTCCAATTTGGAACCTGGTGACCTGATTGGTGGAGAGCTTTTGTCAATTCTGAGGGCCATGGAAGTGGCTTTTCACTTGGGGAGTATAAATTACACATAA 681 0.4391 MSNFTPLPGRWRRGVRAYDAHTTNNSESNEVPVFYRSHSTRVNDERSSGVSDPLQWWEPHSRQQTNVPNGDIGRGFNPRLRQIFQQPHSRSTVQTSTQAPRVEENTKSTALSKLKKVIYNNNPTPKSLARRVSLYYRDNSNALKKRVKEKDEDGKRCDPKEEVMLTPCNHMFHEDCIRVNNNTSSSFSRNNDIVSNLEPGDLIGGELLSILRAMEVAFHLGSINYT* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2949 226 MobiDBLite consensus disorder prediction 86 107 - -
Lja3g2949 226 SUPERFAMILY RING/U-box 158 185 - -
Lja3g2949 226 Pfam RING-like zinc finger 159 177 IPR001841 -
Lja3g2949 226 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 225 - -
Lja3g2949 226 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2949 60 221 C3H Transcription Factor Family AT3G58720 33.854 1.08e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2949 - - lja:Lj0g3v0000089.1 249.98