Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2941 ATGATGGTGATGATGACAACTACTTCCACAACTGCAACGTGCTTACTGATTGTGGCGCCTCTGGTTCTGCTTTGGACATGGAAGCTCCTGAACTGGGTGTGGTTGAGGCCAAAGAGACTGGAGAGGTTGTTGAGAGCGCAGGGCCTTCAAGGCAATCCGTACAAGCTTTTGGTTGGGGACAGTGCCGAGATGATCAAGATGATGAAGGAGAATGCTAAATCTCAACAACCCACGAGTTCTCTCTCAGATGATAAGGATGTCTCGCCACATGTCTTCATGTTTATACATCATATCATCAACAAATTTGGAAAGAATTCATTTTTTTGGGAAGGTCCTACCCCAAAAGTGATGATTACAAACCCTGAGCAAATCAAGGAAGTCTTTAACAACATCCATGACTTTGGGAAACCTAAGTTGAGCCCCATTTTCAAGCTATTGGGAACTGGACTTAATAGTTACGAGGGTGAGAAATGGAAGATGCATCGAAAGATTATCAACCCTGCTTTCCATTCAGAAAAATTGAAGGTTATGTCATCGGAAATTTTCCAATGCTGTGATGAAATGATTAGCAAATGGGAGGAGTTAATGTCTAATTCAGATGGAAAATTTGAAATCGATGTTTGGCCTTTCCTTCAAATTATGACCAGTGATATTATTTCTAAAACAGCATTTGGGAGTAGTTATGAAGAAGGGAAAAAAATATTCCAACTCTTGAAAGAGCAAACCGGACTTATTATGAAATTACGAAACGTCTACATTCCAGGATGGCGGTTACTACCAACTACTACACATCAAAGGATGAACAGAATTGATAGAGATATACAAGCATCCCTTAAGACTATCATTGACAATCGAGTGAGAGCAATGAAGGCTGGTGAGGTCCTAAACAACGATTTATTGGGCTTACTTTTGGAATCAAATAATCAAGAAATTCAAGAACATGGTGGAAACAGAAAAAAATATGGAATGACCAACCAAGAAGTAATTGAGGAATGCAATGCATTCTACCTAGCAGGGCACGAAACCTCATCAGTTCTAATGGTTTGGACAATGATATTGTTGAGTAGATATCCTGATTGGCAAGCACGTGCAAGGGAGGAAGTCTTGCAAGTTTTTGGCAACCAAAAGCCAAACAATGAAGGGTTGAGTCGCCTTAAAATCGTTACCATGGTCCTATATGAGGTTCTAAGGTTATACCCGCCAGTAATTTACTTCAATAGAGTCGCTCGCAAAGATGTGAAGCTTGGAAACTTTACCATACCAGCAGGAGTGAATGTTTCCCTACCAATACTCTTAATTCACCATGATCGCAATATCTGGGGGGATGATGCTACTGAGTTCAAACCAGAAAGATTTTCTGAAGGACTTGCAAAGGCAACCAAAGGACAAGTCTCATTTTTCCCATTTGGATGGGGTCCTAGAGTGTGCATTGGACAAAACTTTGCTCTCTTGGAAGCAAAGATAGTTATATCATTGATTTTACAACGTTTCTCATTTGAGCTTTCACCAACATATGCACATGCTCCGAGGACTACATTCTCTCTTAATCCAAAACATGGAGCTCATATCATCTTACACAAATTGTAG 1587 0.4026 MMVMMTTTSTTATCLLIVAPLVLLWTWKLLNWVWLRPKRLERLLRAQGLQGNPYKLLVGDSAEMIKMMKENAKSQQPTSSLSDDKDVSPHVFMFIHHIINKFGKNSFFWEGPTPKVMITNPEQIKEVFNNIHDFGKPKLSPIFKLLGTGLNSYEGEKWKMHRKIINPAFHSEKLKVMSSEIFQCCDEMISKWEELMSNSDGKFEIDVWPFLQIMTSDIISKTAFGSSYEEGKKIFQLLKEQTGLIMKLRNVYIPGWRLLPTTTHQRMNRIDRDIQASLKTIIDNRVRAMKAGEVLNNDLLGLLLESNNQEIQEHGGNRKKYGMTNQEVIEECNAFYLAGHETSSVLMVWTMILLSRYPDWQARAREEVLQVFGNQKPNNEGLSRLKIVTMVLYEVLRLYPPVIYFNRVARKDVKLGNFTIPAGVNVSLPILLIHHDRNIWGDDATEFKPERFSEGLAKATKGQVSFFPFGWGPRVCIGQNFALLEAKIVISLILQRFSFELSPTYAHAPRTTFSLNPKHGAHIILHKL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2941 528 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 16 524 - -
Lja3g2941 528 SUPERFAMILY Cytochrome P450 89 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Lja3g2941 528 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 524 - -
Lja3g2941 528 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 Pfam Cytochrome P450 90 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2941 528 Gene3D Cytochrome P450 83 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2941 Lja-Chr3 53154329 53157873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2941 25 528 Cytochrome P450 AT3G14610 53.557 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2941 - K17873 gmx:100781923 786.949