Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2939 ATGGACGTAGCAGGGGTCATAAGTGCAGCCATAGTTCTGATATTGATATTTGCTTTGATATGGGCATGGAGGGTGCTAAACTGGTTGTGGCTGAGACCAAAGAAGCTGGAGAGGCTGCTGAGAGAGCAAGGTCTAAAAGGGAATCCGTATAAGTTTTTGGTGGGAGACATGAATGATTTTCTCAATATGCAAAAGGAAGCCCAATCCAAACCCATGGGTCTCTCTGATGACATAGTTTCACACGTGTGTCCCTATTTCGAACATAGTGTCAACAAACACGGAAAAAATTCTTTTATCTGGTTTGGACCAACACCAAGGTTTACCTGTACAGATCCTGAACTGATCAAAGATGTACTTAACAAGATCTATGACTTCCCAAAGCCTGACAATAATCCTCTTGCAAAGTTACTAGTTTCTGGTCTTGTAACTCATGAAGGAGAAATATGGAGAAAGCATAGAAAGATAATCAACCCTGCATTCAGTTTAGAGAAATTGAAGATTATGTTACCAATATTCTTCAGAAGTTGTTATGATCTAATTAGCAAATGGGAGGGAATGTTGTCTCCTGATGGATCATGTGAAATGGATGTATGGCCTTTCCTTCAAAATTTAGCAAGTGATGTTATATCTCGGACTGCATTTGGAAGTAGTTATGAAGAAGGCATGAGAATATTTCAACTTCAAAAAGAGCAAGCTGAACTTACAATGAAAGTTATAATGAAAGTTTACATCCCTGGATGGAGGTTCCTACCTACTCCTACTCATAGGAGGATGAAGGAAATTTCAAGAGATATAAATGATTCTCTCAAGAAGATCATTAACAAGAGGGAGAGAGCACTAAAGGAAGGTGAAGCCAGTAAGAATGACTTGTTAGATATTCTTTTGGAGTCAAATCACAAGGAAATTCAAGAATACGGAAGCAAGAAGAATGTTGGGTTGAATCTTAAAGATGTGATTGAGGAATGCAAGCTATTCTACTTTGCAGGGGAGGAGACCACTTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACCCTAATTGGCAAGAACGTGCAAGGGAGGAAGTTGTAAAAGTATTTGGTAATGAAAAACCAGATTTTGATGGGCTAAGTCACCTTAAGATCGTCACTATGATTTTGTATGAGGTTCTGAGGTTATACCCTCCAGTTATTGGGCTTGCTAGAAATGTTCACAAAGATGTGAAACTTGGAAACATTACGTTACCAGCTGGAGTGCAGATTTCAATACCAAAACTTTTGGTTCACCATGACTCTGAATTATGGGGTGATGATGCTACAGAGTTCAATCCTGAGAGATTCTCTGAAGGGCTTCTGAAAGCAACAAAAGGAAGAGTTTCATTCTTTCCTTTTGGATGGGGTCCTAGAATATGTATTGGACAAAACTTTTCCCTATTGGAAGCAAAGATGGCTTTATCAGTGATTTTACAACGTTTCTCATTTGAACTTTCTCCAGCCTATGCTCACGCTCCAGTTACAGTAATTACTCTTCAGCCACAGTATGGTGCTCATATCATTCTACGGAAAGTGGGAGCATAA 1563 0.3922 MDVAGVISAAIVLILIFALIWAWRVLNWLWLRPKKLERLLREQGLKGNPYKFLVGDMNDFLNMQKEAQSKPMGLSDDIVSHVCPYFEHSVNKHGKNSFIWFGPTPRFTCTDPELIKDVLNKIYDFPKPDNNPLAKLLVSGLVTHEGEIWRKHRKIINPAFSLEKLKIMLPIFFRSCYDLISKWEGMLSPDGSCEMDVWPFLQNLASDVISRTAFGSSYEEGMRIFQLQKEQAELTMKVIMKVYIPGWRFLPTPTHRRMKEISRDINDSLKKIINKRERALKEGEASKNDLLDILLESNHKEIQEYGSKKNVGLNLKDVIEECKLFYFAGEETTSVLLVWTMVLLSRYPNWQERAREEVVKVFGNEKPDFDGLSHLKIVTMILYEVLRLYPPVIGLARNVHKDVKLGNITLPAGVQISIPKLLVHHDSELWGDDATEFNPERFSEGLLKATKGRVSFFPFGWGPRICIGQNFSLLEAKMALSVILQRFSFELSPAYAHAPVTVITLQPQYGAHIILRKVGA* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2939 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lja3g2939 520 Gene3D Cytochrome P450 76 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 SUPERFAMILY Cytochrome P450 80 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 516 - -
Lja3g2939 520 PANTHER CYTOCHROME 10 516 - -
Lja3g2939 520 Pfam Cytochrome P450 89 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2939 520 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2939 Lja-Chr3 53122722 53144431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2939 5 518 Cytochrome P450 AT3G14690 56.893 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2939 - K23809 gmx:100777623 805.053