Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2928 ATGGAGAACAACGCCGAGGAGTCGCGGAAGCAAGCGAGGCTCGCCATTATGGAGCTGGCGAACATGATAAGCGTTCCCATGTCCCTCAACGCCGTCGTTCGCCTCAACGTCGCTGACGCCATCTGGCAAGGCGGTTCCAACGCTCCTCTCTCCGCCGCACAGATCCTTGAGCGCGTTCTTCCTGGCGGCGACGCTGAGAACCTCCAGCGCGTCCTCCGTATGCTGGCTAGCTACGGCGTCTTCGAGGAGCACATCGGCGGCGGCAAAAGAACATACTCCCTGACGGACGTTGGCAAAACGCTCGTTTCCGATGAACAAGGCCTATCCTATGCGGCTTATGTTCTCCAACACCACCAGGATGCGTTGATGAGAGCATGGCCATTGGTACATGAGGCAGTTGTGGACCCTACGAGGGAGCCCTTTGAGAGGGCAAACGGAGAGGCAGCATACATGTACTATCTGAAGCAATCAGAGATGAACGAGTTAATGTTGAAGGCCATGTCAGGGGTCTCAGTGCCCTTTATGAGGGCAATGTTGGATGGATATGATGGCTTCCAAGGTGTGGAGAAGTTGGTGGACGTGGGTGGCAGCGGCGGTGACTGCCTCCGCATGATCTTGCAGAAACACCCCTCCATCAAGGAAGGAATCAACTTTGACCTCCCTGAAGTTGTCGCCAAAGCACCACAAATTCCAAGTGTAACCCATGTGGGTGGTGACATGTTCAAATATATTCCCCAAGCGGATGCTATCTTTATGAAGTGGGTGCTGACAACATGGACCGACGAGGAATGCAAGCACATAATGGTGAACTGTTACAAGGCACTTCCAAAGGGAGGAAAACTAATGGCTTGTGAGCCAGTGCTTCCAGAAAATTCCGATGATAGTCACAGAACCAGAGCATTGCTTGAGGGTGATATATTCGTGATGACAATCTACAGAGCCAAGGGGAAGCACAGGACTGAAGAACAGTTCAGGCAGCTAGCCATTTCAGCAGGTTTTAATCGTTTCAGATCCTTTCATGTTGACCATTTCTATACCGTCCTTGAGTTTCAGAAATGA 1059 0.5184 MENNAEESRKQARLAIMELANMISVPMSLNAVVRLNVADAIWQGGSNAPLSAAQILERVLPGGDAENLQRVLRMLASYGVFEEHIGGGKRTYSLTDVGKTLVSDEQGLSYAAYVLQHHQDALMRAWPLVHEAVVDPTREPFERANGEAAYMYYLKQSEMNELMLKAMSGVSVPFMRAMLDGYDGFQGVEKLVDVGGSGGDCLRMILQKHPSIKEGINFDLPEVVAKAPQIPSVTHVGGDMFKYIPQADAIFMKWVLTTWTDEECKHIMVNCYKALPKGGKLMACEPVLPENSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLAISAGFNRFRSFHVDHFYTVLEFQK* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2928 352 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Lja3g2928 352 Gene3D Vaccinia Virus protein VP39 107 352 IPR029063 -
Lja3g2928 352 PANTHER OS02G0823400 PROTEIN 4 351 - -
Lja3g2928 352 Gene3D - 1 106 IPR036388 -
Lja3g2928 352 SUPERFAMILY "Winged helix" DNA-binding domain 8 105 IPR036390 -
Lja3g2928 352 PANTHER O-METHYLTRANSFERASE 4 351 IPR016461 GO:0008168
Lja3g2928 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 350 IPR029063 -
Lja3g2928 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 352 IPR016461 GO:0008168
Lja3g2928 352 Pfam O-methyltransferase domain 130 334 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2928 Lja-Chr3 52515705 52530259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2928 1 352 Monolignol Biosynthesis Gene Families AT3G53140 75.487 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2928 - - gmx:100784957 625.165