Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2920 ATGGATCATCTTGGATGTTTCAATGTAACTATGCTTAATCCCAATCGAATATGGCAAACTGGTAATGTTCTAAAATCAGAGCTGCCTATTATCGCCGTTCAACTTACCTGGACTGCAATGATGTCTCGTCTTTTCTTCTTTGTCTATAAACCTCTTCACCAACCTCGTCTCATATCACAGATCTCTGTGGGTATCCTACTAACTTACCCATTCTTAGGGAAGTTTCAAATTATTTTCCGGTTCATTTTTCCAGTAGAAGGTGTCCTAAACATCGAAGTGTTGGCACACTTTGGGCTAATCTATTATGCCTTTCTCACCGGTTTAGAGATGAATTTGAACACCATTCTTCACGCGAAAAAAAAGGCGGTGAGCATAGCCGCTGCTGGGATCATCTTCCCCATGGTTGTTGCACCCGGCCTCTATTATCTGCATCGAAGACACTATATAATTGACCCTAATCAACGCTTGACCCTAATGGAGGAAAGTTCAATAAGCGGTTATTTGATATGGACTCTAGTTCTTACCGTGACAGGTTTCCCGGTGGTGGCTCACACGCTTTCCGAGCTCAAGCTCCTATACACCGGTCTCGGTAAGAATGCCATAACCGCCGCCATGATCAGCGATACCTACAGCTGGATTCTGTTCATGTTGTTGATTCCGTTCTCGACCATTGGTGAGAAGGCAGTGTACTCCGTCGTAAGCACCATAGTCTTCGTTTTTGTATGCATCTTTTTAGTACGTCCGATCCTTATGCGGATTATCAATCGCAAGACGGAGAATGGCGAGTTGGATGATGAGGAATTGTTGTATGTGGTGATGGGGGTTTTGGTTTGTTCATTAATTACAGAAGTTCTGGGAACACATTCCATTGTCGGGGCTTTTGTGTACGGACTGATTTTACCTCATGGGAGGTTCGCTGACCATCTGATTTCGATTTCAGATGATTTTGCTGGTGGATTTTTTGTGCCTCTCTACTTCAGTGGAAGCGGAATGAGACTTTTGTTCCAATCCATGTTCCTCCAAGTGCATTGGCCTTTTACAGGGTTGATTGTGCTCTTGTTGTGTACCCTCAAGATTGTAAGCACTTTGTTTACAACTTTCTTCTTTGGCATGCGCTTTCAAGATGGTTTGTCCTTAGGCTTGATTCTCAATTCCAAAGGTGCTATAGGATTGATCATGCTCGCCATGGCTTGGGACAGACAGATTTTTATGATACCGACCTATTCTGTGGCTACTTCAGCTGTTATTCTAATGACCATGGTAGTTGCGCCCATCATCAACATCATCTACAAGCCAAGAAAGAGATTTGAGCAGAACAAACTAAAGACCATACAAAAGCTAAGAGTTGATGCAGAGCTTCGAATCCTAGCATGTGTCCACAACAATCGCCATGCAACAGGAATGATAAGCCTCATCGAATCCTTCAATGCCACGAGACTCTCCCCGATGCACGTCTTCGCTCTTTTCCTCGTTGAACTTACCGGACGTGGAGCTGCCCTTGTTGCCGCCCACATGGCGCAACCTATCAGCCAGGTCGGAGAACAAAACCTGACCAAATCTCAAGCAGAGTTTGAAAGCGTCAATCACACCTTCCAATCATTAGCTGAGGCCTACGATGCTGTGAGAGTCCAAACCCTGAACGTGGTGTCAGCCTACGCAACCATTCACGAAGACATATACAATGCGGCCAATGAGAAACGTACGAGCTTAATTCTCCTTCCGTTCCACAAACACTTAACCTCAGAAGCGTCGCTTGAAACCACAAGTGTCGCGTACAAAGACATAAATCAAAACGTGATACAAGGTGCGCCTTGTTCCGTTGGAATCTTCGTGGATCGGGACTTCGGGTTGTTGCCCAAAACCGACATCCGTATTATCATGCTGTTTGTTGGAGGGCCGGACGACCGTGAAGCCTTGGCCGTTGCATGGAGGATGGCCGGGCATCCAGGAATCCAACTATCAGTTTTTCGAGTTCTCTTGTTCGATGAAGCCGCAGAGGTGGATACTACACATCACAGTGAAGCGCAGGGAATACTGAATGCCGTAATGGATAGTGAGAAGCAAAAAGAGTTGGATGATGAGTACGTGAGTGCGTTTCGGCTCACTGCAGTGAACAATGACGACTCTATCTCGTACTCGGAGGTTGATGTCCATAATGGTGAGGAAATACCTATGGTACTAAATAAGCTCGACAAGCTTGCTTGTGACTTGTACATAGTGGGACAAGGGAATTGTAGGAGTTCTCGTGTTTTTTCAAGTTTGTTGGAATGGTGTGATTGCATTGAGCTTGGAGTGGTAGGGGATATTTTGGCGTCTAACAATTTTGGGTCGCGGGCTTCTGTGCTGGTTGTGCAACAATATGGATATGGAGGAATGGTTTTGGGAAAGAATTTAAAACATGCGACTACTAATATTGATGGCTTTGAGACTCTTGTTGTGAAGGCAGAATGA 2451 0.4517 MDHLGCFNVTMLNPNRIWQTGNVLKSELPIIAVQLTWTAMMSRLFFFVYKPLHQPRLISQISVGILLTYPFLGKFQIIFRFIFPVEGVLNIEVLAHFGLIYYAFLTGLEMNLNTILHAKKKAVSIAAAGIIFPMVVAPGLYYLHRRHYIIDPNQRLTLMEESSISGYLIWTLVLTVTGFPVVAHTLSELKLLYTGLGKNAITAAMISDTYSWILFMLLIPFSTIGEKAVYSVVSTIVFVFVCIFLVRPILMRIINRKTENGELDDEELLYVVMGVLVCSLITEVLGTHSIVGAFVYGLILPHGRFADHLISISDDFAGGFFVPLYFSGSGMRLLFQSMFLQVHWPFTGLIVLLLCTLKIVSTLFTTFFFGMRFQDGLSLGLILNSKGAIGLIMLAMAWDRQIFMIPTYSVATSAVILMTMVVAPIINIIYKPRKRFEQNKLKTIQKLRVDAELRILACVHNNRHATGMISLIESFNATRLSPMHVFALFLVELTGRGAALVAAHMAQPISQVGEQNLTKSQAEFESVNHTFQSLAEAYDAVRVQTLNVVSAYATIHEDIYNAANEKRTSLILLPFHKHLTSEASLETTSVAYKDINQNVIQGAPCSVGIFVDRDFGLLPKTDIRIIMLFVGGPDDREALAVAWRMAGHPGIQLSVFRVLLFDEAAEVDTTHHSEAQGILNAVMDSEKQKELDDEYVSAFRLTAVNNDDSISYSEVDVHNGEEIPMVLNKLDKLACDLYIVGQGNCRSSRVFSSLLEWCDCIELGVVGDILASNNFGSRASVLVVQQYGYGGMVLGKNLKHATTNIDGFETLVVKAE* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2920 816 PANTHER CATION/H+ EXCHANGER 3 17 801 - -
Lja3g2920 816 Gene3D - 31 440 IPR038770 -
Lja3g2920 816 PANTHER CATION/H + ANTIPORTER 17 801 - -
Lja3g2920 816 Gene3D - 479 749 - -
Lja3g2920 816 Pfam Sodium/hydrogen exchanger family 39 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2920 Lja-Chr3 51560232 51563615 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2920 6 787 Antiporter Super Family AT2G13620 36.616 1.77e-177 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2920 - - gmx:100804266 1209.13