Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2912 ATGGTTGTTCTAAGTAGCCGGATTTTCAGTTCTCATATTTTTGTTAACTTCATGCTGCTGATTAGTATCGGGACAACCTATGGGACTGAAACTGACATCTTGTGCTTGAGAAACATAAAAAATTCCCTTCAAGACCCCAATAATTATTTGCAATCATCTTGGAATTTCAACAACAATACTGAAGGGTTTATCTGTAGATTTAATGGGGTTGAATGTTGGCACCCTGATGAGAACAGGGTTTTGAACCTCAAACTGTCCAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTGTAAATTGCTCAAGCTTAACAGGCTTAGATCTTTCGAATAATGGTCTTTCTGGAACCATTCCAGTAGATATAAACACTCTTGTACCATTTGTGACAGCTTTTGATCTATCTTCAAATGAATTGTCTGGGAATATACCTGTCAATCTTGCAAATTGTACCTATCTTAATACCCTGAAACTCGACCAGAATCGACTCACAGGTCAAATTCCTGCACAATTGGGCCTTCTTCAACGACTCAAGACATTTTCAGTAGCTAAGAATCTTTTGACGGGACCAGTTCCGAACTTTCCCAGTGGCAAAGTTGACGTAAGCTATGGAAATAATCAAGGCCTGTGTGGAGGTTCATTGGGGAGTTGCCAGGACAGTGGTTCCTCCAAGAGTAACACTGCAGTTATAGCTGGAGCAGCTGTTGGTGGGGTGACTCTTGCAGCATTAGGATTGGGTGTTGCAATGTTCTTCTACGTGCGCCGTGTTTCGTACAGGAAGAAGGAAGTGGACCCTGAAGGCAACAGATGGGCAAGAAGTCTAAAAGGAACTAAAGCAATTAAGGTTTCTATGTTTGAGGGATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAGCTTCAGCAACAACAATATCATTGGGTCAGGAAGAACAGGAACTTTTTACAAAGCTTCTCTTGTTGATGGCCCAACACTCATGGTTAAGAGATTGCAGGAATCTCAGCACTCTGAGAAAGAATTTATGTCTGAGATGCAAACATTGGGGACTATCAAACATCGTAACCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAAGGAGAGGCTGTTGGTCTATAAAAACATGCCGAATGGCAACCTCCATGATCAACTACATCCCGCTGCTGGTGAGTGCACCCTTGATTGGCCTTTGAGACTGAAAATTGCAATTGGAGCAGCCAAAGGATTGGCGTGGCTTCACCATAGCTGCAATCCCCGTATTATCCACCGAAACATAAGCACCAAGTGCATCTTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAGATTGATGAACCCAGTCGATACTCATTTGAGTACTTTTGTCAACGGTGAGTTTGGGGATTTAGGTTATGTTGCTCCCGAGTATGCAAAAACTCTGGTAGCGACACCTAAGGGGGATGTTTTTAGCTTTGGAACCATACTTCTTGAGTTGGTAACGGGTGAAAGACCTACAACTGTGTCTAAAGCTCCAGAAACTTTTAAAGGAAATCTCGTAGATTGGATTACAGAGCTCTCAAGCAACTCACAACTCCATGATGCCATTGATGAATCACTAGTCGGCAAGGGTGTTGATAATGAGCTTTTCCAAGTTTTGAAGGTTTCATGCAACTGTGTTTTATCAATTCCAAAGGAGAGGCCCACCATGTTTGAAGTATATCAGCTTTTAAGAGCTATTGGGGGTGCATACAATTTCACAACTGAGGATGAGATATTGTTACCGGAAGATATTGGTGATACTGAAAACATGGTGGAACTTATTGTTGCTCGAGAAGGAAATAACTGA 1851 0.4198 MVVLSSRIFSSHIFVNFMLLISIGTTYGTETDILCLRNIKNSLQDPNNYLQSSWNFNNNTEGFICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIVNCSSLTGLDLSNNGLSGTIPVDINTLVPFVTAFDLSSNELSGNIPVNLANCTYLNTLKLDQNRLTGQIPAQLGLLQRLKTFSVAKNLLTGPVPNFPSGKVDVSYGNNQGLCGGSLGSCQDSGSSKSNTAVIAGAAVGGVTLAALGLGVAMFFYVRRVSYRKKEVDPEGNRWARSLKGTKAIKVSMFEGSISKMKLSDLMKATNSFSNNNIIGSGRTGTFYKASLVDGPTLMVKRLQESQHSEKEFMSEMQTLGTIKHRNLVPLLGFCMAKKERLLVYKNMPNGNLHDQLHPAAGECTLDWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISTKCILLDADFEPKISDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYAKTLVATPKGDVFSFGTILLELVTGERPTTVSKAPETFKGNLVDWITELSSNSQLHDAIDESLVGKGVDNELFQVLKVSCNCVLSIPKERPTMFEVYQLLRAIGGAYNFTTEDEILLPEDIGDTENMVELIVAREGNN* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2912 616 PANTHER LRR RECEPTOR-LIKE KINASE 5 593 - -
Lja3g2912 616 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Lja3g2912 616 SUPERFAMILY Protein kinase-like (PK-like) 282 578 IPR011009 -
Lja3g2912 616 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Lja3g2912 616 Gene3D Phosphorylase Kinase; domain 1 265 377 - -
Lja3g2912 616 ProSiteProfiles Protein kinase domain profile. 304 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2912 616 Gene3D Transferase(Phosphotransferase) domain 1 379 593 - -
Lja3g2912 616 Pfam Protein tyrosine and serine/threonine kinase 307 577 IPR001245 GO:0004672|GO:0006468
Lja3g2912 616 PANTHER RECEPTOR-LIKE PROTEIN 55 5 593 - -
Lja3g2912 616 SUPERFAMILY L domain-like 30 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2912 Lja-Chr3 50293709 50297150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2912 14 592 Receptor kinase-like Gene Family AT3G28450 45.812 1.69e-176 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lja3g2912 PK_Tyr_Ser-Thr 1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2912 - - gmx:100817267 924.08