Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2892 ATGACGTCGGGGACGAGACAGCCGACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGGAGGAGAGCCATAGCGGCGAAGATCTTCGCCGGTTTGAGGATGTACGGGAACTACAAGCTTCCGAAGCACTGCGACAACAACGAAGTCCTCAAAGCTCTCTGCAACGAAGCCGGTTGGATCGTTGAACCGGACGGCACCACGTATCGCAAGGGATGCAAGCCAGTTGAACGCATGGACGTGGTAGGTTGTTCTGCAGCGCCAAGCCCATGTTCATCTTACCATCCAAGTCCCTGTGCTTCTTACAACCCAAGTCCAGGCTCTTCTTCCTTCCCTAGCCCTCGCTCATCGCCTTATGCTGTAAATCCTAATGGGGATGGCAATTCCCTCATTCCATGGCTCAAAAACCTGTCATCTGGATCATCATCAGCATCCTCTTCAAAGCTTCCACAACTATTTATTCATAGTGGATCTATCAGTGCTCCTGTAACTCCTCCTCTTAGCTCTCCAACTGCCCGAACGCCCCGAATGCAAGCTGACTGGGAGGATCAGTCCACTCGTCCTGGGTGGGGTGGACAGCAGTACCCCTTCCTGCCCTCTTCCACTCCTCCAAGCCCCGGCCGCCAGGTTGTTGACCCAGATTGGTTTGCTGGGATTAGGATGCCCCATGGGGGTCCAAATTCTCCAACCTTCAGCCTGGTCTCTTCTAACCCATTTGGCTTTAAGGACGAGGTTTTCGTCGGCAGTGGTTCCCGCATGTGGACACCTGGGCAAAGTGGGACATGTTCTGCAGCTATAGCTGCTGGCTCTGATCACACTGCTGACATTCCAATGGCCGAAGCGGTTTCAGACGAATTTGCCTTTGGAAGCAGCACAGCAGGTTTGGTGAAGCCTTGGGAAGGAGAGAGGATCCATGAAGATTGCGGATCAGATGATTTGGAGCTCACTCTTGGGAGTTCAAAGACCAGGTAA 975 0.5323 MTSGTRQPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCKPVERMDVVGCSAAPSPCSSYHPSPCASYNPSPGSSSFPSPRSSPYAVNPNGDGNSLIPWLKNLSSGSSSASSSKLPQLFIHSGSISAPVTPPLSSPTARTPRMQADWEDQSTRPGWGGQQYPFLPSSTPPSPGRQVVDPDWFAGIRMPHGGPNSPTFSLVSSNPFGFKDEVFVGSGSRMWTPGQSGTCSAAIAAGSDHTADIPMAEAVSDEFAFGSSTAGLVKPWEGERIHEDCGSDDLELTLGSSKTR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2892 324 MobiDBLite consensus disorder prediction 97 124 - -
Lja3g2892 324 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 324 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lja3g2892 324 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Lja3g2892 324 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 324 - -
Lja3g2892 324 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2892 Lja-Chr3 48784564 48790630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2892 1 324 BZR Transcription Factor Family AT1G78700 71.257 9.27e-137 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lja3g2892 BES1_N 6.9e-67 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2892 - - tcc:18594295 528.094