Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2819 ATGCTAAGAAAAATCTTCTTCTTCAAACCCTCACCTCCCATATCACCATCTTCCTCTCTTCAAAGCAAGACCTTCTCCGATTCATTAATGGAAGAAAACATCGAAACCGCTCGCACCCTCATAACCAAATGGAACCCTTTTCCCGCTTCCAATTGCGCCAAAACCACTCCCATTCTTTTCACCAACACCCACCATGAAGCCAAAGAGTTTCTTAAGGCAGTCAAGAGACTACATTCCACTATGATGCACCTCATCACACAGGATTCCTCCTCTGAGAAGCTCGTCAAAGCCCAATCCCTCATGCAATGCGCCATGAAGAGGCTCGAGATGGAGTTCTACAGAATTTTGGCCCAAACCAGAGACGGTTTGGACCCTAAATCACTCTCGGGCCAATCCTCCATAATTAACGAGGATTGGGTCGAGAGAGATTCAGTGTCGACCGCGGCCATTATGGATTTGAAAGCCATTGCCGAATGCATGGTCTCCGCCGGCTACAGCAAAGAGTGCGTAAGGGTTTATATCATGGTGAGAAAGCCGATTGTGGATGAGGCAATGTACCTTCTTGGAGTGGAGAGGCTAAGCTTCTCTCAGTTTCAGAAGATGGAATGGGAGGTGATCGAGTCGAGGATCAAGTGCTGGCTGAGCGCCGTGAAACTCGCCTTCGGCACTCTGTTTCCCGGCGAGAGAAACCTCTGCGATTACATCTTCGGTTCGCCGGAGAGGAAGGTCGCAGAGTCCTGTTTGACCGAGACATGCAGAGACGCCGCCGCGTGCCTGTTTGGATTCGCGGAAAATGTGGCGAAGTGCAAGAAAACTCCCGAGAAAATGTTCAGGACACTGGACCTGTACGAAGCGATCTCTGAGCACCGGCAACAAATTGAGTCCATCTTCTCCTCCGCGATCAGGACGCATGCCACCGCGGTACAGGCGAGGCTCGCGGAGGCTGTGAGGAAGATGCTGTCAGATTTCGAATCAGCGATTCAGAAGGAATCCTCCAAGATTCCGGTGCCAGGCGGAGGGATCCACCCGCTGACACGCTACGCCATGAACTACACCGCGTTCCTCGCCGATTACAGCGACGCGCTCGCGGAGATAGTCACCGATTGGCCGCAGAGTCCGCTGCCGGAGTCCTATTACGGTGACGAGAACAGTACTCCGCCGTCGGAGACGGCGGAAATGCTCGCGTGGCTGATACTGGTGATTCTCTGCAAGCTTGACGGGAAAGCGAAGCTCTACAAGGATACGGCACTCTCTTACCTGTTCCTCGCGAACAACATGCAATACGTCGTCGTAAAGGTTCGGAAATCGAACCTAGGGTTTCTTCTCGGCGAGGATTGGTTGACGAAGCACGAGGCGAAGGTGAAGGAGTACGCATCCAAGTACGAGCGTGTAGGGTGGAGCAACGTTCTACAATCGCTGCCGGAAAATCCGACGGCGGAGGAGGCGGTGGCTATTTTTCAGAGTTTCAACGCCGCATTCGTTGAAGCTTGCGGAGCGCAGTCGTCGTGGGTGGTGCCCGACCCGAAACTCCGGCAGGAAATCAAAGCGTCGATAGGTTTGAAGGTGGTGGTCAGGTACCGGAAGTTCTACGAGAGGAACCGGGTCGGGTCGGAGTCAGTGATAAGGTTTTCGCCCGATGATTTGGAGAATTGTCTTTCAGTCTTTCTGAGATTTTGTGTGGGTCGGAACAATCGGGTTCCGGTAATCGGTTCAAAGGCTCGTGAAGTTGGATAG 1734 0.5283 MLRKIFFFKPSPPISPSSSLQSKTFSDSLMEENIETARTLITKWNPFPASNCAKTTPILFTNTHHEAKEFLKAVKRLHSTMMHLITQDSSSEKLVKAQSLMQCAMKRLEMEFYRILAQTRDGLDPKSLSGQSSIINEDWVERDSVSTAAIMDLKAIAECMVSAGYSKECVRVYIMVRKPIVDEAMYLLGVERLSFSQFQKMEWEVIESRIKCWLSAVKLAFGTLFPGERNLCDYIFGSPERKVAESCLTETCRDAAACLFGFAENVAKCKKTPEKMFRTLDLYEAISEHRQQIESIFSSAIRTHATAVQARLAEAVRKMLSDFESAIQKESSKIPVPGGGIHPLTRYAMNYTAFLADYSDALAEIVTDWPQSPLPESYYGDENSTPPSETAEMLAWLILVILCKLDGKAKLYKDTALSYLFLANNMQYVVVKVRKSNLGFLLGEDWLTKHEAKVKEYASKYERVGWSNVLQSLPENPTAEEAVAIFQSFNAAFVEACGAQSSWVVPDPKLRQEIKASIGLKVVVRYRKFYERNRVGSESVIRFSPDDLENCLSVFLRFCVGRNNRVPVIGSKAREVG* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2819 577 SUPERFAMILY Cullin repeat-like 56 553 IPR016159 -
Lja3g2819 577 Gene3D Exocyst complex component Exo70 50 558 - -
Lja3g2819 577 Pfam Exo70 exocyst complex subunit 212 553 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja3g2819 577 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 563 IPR004140 GO:0000145|GO:0006887
Lja3g2819 577 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 2 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2819 Lja-Chr3 42791227 42793275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2819 7 553 EXO70 exocyst subunit family AT5G59730 46.891 5.20e-169 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2819 K07195 - gmx:100801773 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2819 3 42791227 42793275 Lja3g2819 3 42791227 42793275 ECH