Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2788 ATGAATACAATCATAAATGTAAATCAGAGTTTGTTCTTGACAATTGATAAATTCAATGAAACCTTCTACAATGTTTGTTATGCTTCACCACCCACTATCGTTTCAGATGGCTTATGGGTTCAAATTGATTACAGGAAGCCAATGAAGGCTTCACTCCCATTGTTAGAGTTGCAGATGCTTATAATTTTTTGCATCACCCAATTCTTCCATTTCTTCCTGAAGCACTTGGATTTCCCTCTATTTGTTCCCCAAGTCATAGCTGGCCTACTTCTAGGCCCTTCTATTCAGCTAGAGGCACTGGACAGATTCAAGAAGTCTGTGTTTCCTTACGGAACCCAAGATACACTTGCAACTATAACATCAATTGGTTATACACTTTTCATCTTCATAACTGGTGTGCAAATGGATTTGAGCATGGTAACCAGGACAGGACACAAGGCATGGACCATTGCCATCATTTCTTTGGTTGTACCACTCATTATTTCTGTTCCAGTTATAGGTTTCTATTTACAGAGCAATTTGGGAGAGTTAATTAAGGACCTTGGTCCTCTAGTGCTATCACAAACTATGATTTCATTTGCAGTCGTTGCTTCCCTCCTCAATGAACTTAAAATCATAAACTCGGAACTTGGCAGACTGGCACTATCCTCGGTGTTGGTGAGTGACATAGTTGGCACAACTGTTTCATGTGTTGCCAACGTCTTAGGCGGCACTGGAGGTACAATGAAACAATTTTCTTTGTCGCTGGTGGCATTGATTGCCATGATTATCTTTGTTCTATTTGTTTGCCGGCCGGCGATGTATTGGATCGTCAAACACACTCGAGAAGGAAGACTTGTGGATGATGGTTACGTCAACATCATCATTATAATGGTCTTTGCTTTAGGCTGGGTTTCAGCTAAATTGGATCAAGACTTCATGTTAGGAGCATTTGTTTTGGGGTTGGCTGTGCCAGAAGGACCACCATTAGGATCTGCATTGGTTAAGAAGCTTGAATTATTTGGCCAGTTTTGGTTTTTGCCTACATATGTGACTTGCCTTGTGATGAAAGTAGATTTGTCCGTGAATTTTTTACAAACATCATTCGGGGTCATTGCTTCCTTCATTACCGTTACCCACATAGTGAAAGTTATAGCATGTGTTGTACCTGCCCTCATGTGCAAGATCCCCTTGAAAGATGCCTTGGCGTTTGCCCTCATTTTGAACGCCAAAGGGGTAGTGGATATCAGCTTCTTCAGTACCCTATATGACGATTCGGCCATTTCTGCCCAAACTTATGCAGCGTTGATAGTCAGCGTAGTGATCATAGCTTGCATAGTGAAGGGGGGATTGAAATTCTTGTATGATCCATCAAGAAAATATGCAGGCTACCAGAAACGGAACATCATGAGTTTAAAATCAAACTCAGAGTTAAGAATACTTGCTTGTATTCACAAACAACACAACATAAGTGCTCTAACAGATGTTCTTGACATATGTTCTCCAACAACACAACACCCGATCATAGTGGATGTACTGCATCTAATTGAGCTTGTTGGAAGGACTAGCCCCATCTTAATCTCACACCGCCTTCAGAAATCGCTCTCAATGGGCTCCCACAAGTCTTACTCAGATGATGTGATCCTTGCTTTTGACCACTTTGAACATGAAAACTATGGTGCAGCAACTGCACACATCTACACAGCAATTTCTTCACCCACACTGATGCATGACGATGTTTGCCAGCTTGCACTAGACAAAGTTGCATCCTTAATTATCGTTCCTTTCCATCAAAGATGGTCCGCTGAAGGTGTAATTGAATCTGATGACAAGAACATAAGGTCTTTGAATTTCACACTCCTAGAAGTGGCTCCTTGCTCAATAGGAATCCTCGTGTACCGTTCTCCATTGCTGAACAACTCATCAGTCCGCTTAGCCATGATCTACATGGGTGGAAAAGATGACAGAGAAGCTCTGTGTTTAGCTAAAAGAACATTGAGAAACCCAAGGATCAACTTGGTTGTATACCACCTTGCTACCGAGGAACGTATGCAAAACTTGGAGTATCTTCTAGATAATAAGGCACTGGAAGGAGTTCAGAAATCACACAATGGGATGGAAAATATGAGTTATCATAAAGTGAAAGTGAATGATGGACCAGGTACTTCTGCTTTTTTAAGAGACATAGTAAATGAGCATGATTTCTTTATAGTTGGGAGAAGACATGAAAATAATCCACAGACATCAGGGCTCACAACTTGGAGTGAGTTTCAAGAGTTAGGTGTCATTGGTGATTTGCTTGCTTCATCAGATTTTGAGAGCAGAGCAGGTGTTTTGGTGGTGCAACAACAAGGCAAAGACACATAG 2346 0.413 MNTIINVNQSLFLTIDKFNETFYNVCYASPPTIVSDGLWVQIDYRKPMKASLPLLELQMLIIFCITQFFHFFLKHLDFPLFVPQVIAGLLLGPSIQLEALDRFKKSVFPYGTQDTLATITSIGYTLFIFITGVQMDLSMVTRTGHKAWTIAIISLVVPLIISVPVIGFYLQSNLGELIKDLGPLVLSQTMISFAVVASLLNELKIINSELGRLALSSVLVSDIVGTTVSCVANVLGGTGGTMKQFSLSLVALIAMIIFVLFVCRPAMYWIVKHTREGRLVDDGYVNIIIIMVFALGWVSAKLDQDFMLGAFVLGLAVPEGPPLGSALVKKLELFGQFWFLPTYVTCLVMKVDLSVNFLQTSFGVIASFITVTHIVKVIACVVPALMCKIPLKDALAFALILNAKGVVDISFFSTLYDDSAISAQTYAALIVSVVIIACIVKGGLKFLYDPSRKYAGYQKRNIMSLKSNSELRILACIHKQHNISALTDVLDICSPTTQHPIIVDVLHLIELVGRTSPILISHRLQKSLSMGSHKSYSDDVILAFDHFEHENYGAATAHIYTAISSPTLMHDDVCQLALDKVASLIIVPFHQRWSAEGVIESDDKNIRSLNFTLLEVAPCSIGILVYRSPLLNNSSVRLAMIYMGGKDDREALCLAKRTLRNPRINLVVYHLATEERMQNLEYLLDNKALEGVQKSHNGMENMSYHKVKVNDGPGTSAFLRDIVNEHDFFIVGRRHENNPQTSGLTTWSEFQELGVIGDLLASSDFESRAGVLVVQQQGKDT* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2788 781 PANTHER EXCHANGER, PUTATIVE-RELATED 17 780 - -
Lja3g2788 781 PANTHER CATION/H + ANTIPORTER 17 780 - -
Lja3g2788 781 Gene3D - 55 454 IPR038770 -
Lja3g2788 781 Pfam Sodium/hydrogen exchanger family 62 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2788 Lja-Chr3 42035294 42038809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2788 25 777 Antiporter Super Family AT5G22900 36.855 3.55e-164 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2788 - - gmx:100797995 951.429