Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2785 ATGTTTGCCTACTGCAAAACCGTGCCCGAAAGTTCTAAAAGTGCGGCAAATTGGACCAATGAGGATACGTTGAATGATAATCTTGGACATGGGACTTTTGTTGCTGGTGTCGTTGCTGGTGTGGATACGGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCTCAGGTATCATATACATCATGGTTCCTTGATGCCTTCAACTATGCTATTGCAACCGATATGGATGTGCTTAATTTGAGCATAGGTGGACCTGATTACTGGGATCTCCCATTTGTGGAAAAGTGGAAGCCTAAAAAATGTAGTACTTATGAAGATAGCCCACAAATTTCCATGGGTACATGTTTGAGTAAAAAGAAAGAGTCTTCTCCCTCCACCCTAATTGCTGAACCCAACTCAGCTACCCCACCATCTAAGAATTCTTCTGCAAATGGTGACCCTTTATCCAAACCAAAAATGGGAACTGAGCCAGAAGCTAATCTGAAGAAGGAGAAAGAAGTTAAAGGGCATGTGAAAAAGGAGATATTCATCATCAAACACAGGAAGAGCCATGATGATGGTGGAGAAAGGAATTCCAGGTCACAGCAAAATGCCCACCAACCATTTGAAGAAATGCATGACAGGATTGCATAA 657 0.4231 MFAYCKTVPESSKSAANWTNEDTLNDNLGHGTFVAGVVAGVDTECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYWDLPFVEKWKPKKCSTYEDSPQISMGTCLSKKKESSPSTLIAEPNSATPPSKNSSANGDPLSKPKMGTEPEANLKKEKEVKGHVKKEIFIIKHRKSHDDGGERNSRSQQNAHQPFEEMHDRIA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2785 218 ProSitePatterns Serine proteases, subtilase family, histidine active site. 30 40 IPR022398 -
Lja3g2785 218 PANTHER PEPTIDASE S8 13 103 - -
Lja3g2785 218 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 13 103 - -
Lja3g2785 218 Gene3D Peptidase S8/S53 domain 4 119 IPR036852 GO:0004252|GO:0006508
Lja3g2785 218 ProSiteProfiles Serine proteases, subtilase domain profile. 1 218 - -
Lja3g2785 218 Pfam Subtilase family 19 102 IPR000209 GO:0006508|GO:0008236
Lja3g2785 218 MobiDBLite consensus disorder prediction 164 200 - -
Lja3g2785 218 SUPERFAMILY Subtilisin-like 15 96 IPR036852 GO:0004252|GO:0006508
Lja3g2785 218 MobiDBLite consensus disorder prediction 123 156 - -
Lja3g2785 218 MobiDBLite consensus disorder prediction 123 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2785 Lja-Chr3 41985458 41987201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2785 64 103 Subtilisin-like Serine Gene Family AT5G19660 97.500 1.05e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2785 K08653 - lja:Lj0g3v0128259.1 195.282