Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2784 ATGGGAAAAATAATAAGGAAAGTGCAGGGGTTGAAACCTGCTCTAGCGATGTTGACGGTGCAGATTATTTTCTCTACGACAAACGTGGTCTACAAACTTGCCATAAACGATGGAGTGAGTGTCAAAATTCTCACTGCCTACCGTCTCATGTTCGCTGGAGCTTTCACCGTTCCACTAGCTCTTATTCTTGAAAGGAAGAACAGAGCAAAGCTTACTTGGAGAGTGCTTTTCATGTCATTTATCTGTGGTTTATTAGGGGGGAGTTTGTTCCAAAACCTTTATTTGGCATCCTTGGCCTTGATATCAGCAACATTTGCTTCTGCTTCTATAAATCTCGTTCCCGCAGTCACTTTTATTTTGGCCATCACATTCGGTTTAGAAAAATTGAAACTTCACAAGGCAGCAGGCAAGGCTAAGGTGCTTGGAACAATATCAGGAATTGGAGGGGCAATGATGTTGACCTTTCTCAAAGGTGTGGAACTTAGCATTTGGCCTTTCCATATCAACATCCTTCATAAAAAACACACTGGAACACACTCTAATAGTAAACTACCTGGTATCTTTTGTGGTCTTGCAAGCTGCTTTTGTTACTCTATATGGCTCATCATTCAGGCTAAGATGAGCAAAGAATATCCGAGTCATTACACTAGTACAGCTTTGATGACCTTAATGGCGGCGGTGCAAGCCACTATTTTTTCCCTTTGTTTTGAGAAGGATTGGAGCCAATGGAGGTTGGGCTGGAGTATTAGGCTTCTAGCTGCAGCATATTCGGGAATTATGTCATCTGGATTAGTGGTTGTTCTAATTGCATGGTGTGTGAGGATGAAAGGTCCACTGTATGTCTCTGTTTTCAATCCAGTGATGCTTGTGCTTACTTCCATTGTTGGTTCCTTGATACTGGATGAGAATCTTTACCTTGGAAGTGCAATTGGAGCGGTTCTAATTATGATTGGATTGTACATGGTGTTGTGGGGTAAGCACAAAGAAATTCAAAAGCTGCCCGTGAAAATCACTCCAGAAATTGGAACAGTTGAGGTTGCTGTCACGCCCACAAAAGTAGAGCATGATAATAGAAGTTGTAGTAGCATCAACAACAATTATGAGAACAATATTATTGATAGTTCATCAAAAAGTTGTCAAGAAGAAGGACACATCAAGGAAAATAACATAAAAGAAACGGCCTCAGATGACATGAAAAGTGCAAATAACACAAAATCTGAAGAGCCATAG 1230 0.4081 MGKIIRKVQGLKPALAMLTVQIIFSTTNVVYKLAINDGVSVKILTAYRLMFAGAFTVPLALILERKNRAKLTWRVLFMSFICGLLGGSLFQNLYLASLALISATFASASINLVPAVTFILAITFGLEKLKLHKAAGKAKVLGTISGIGGAMMLTFLKGVELSIWPFHINILHKKHTGTHSNSKLPGIFCGLASCFCYSIWLIIQAKMSKEYPSHYTSTALMTLMAAVQATIFSLCFEKDWSQWRLGWSIRLLAAAYSGIMSSGLVVVLIAWCVRMKGPLYVSVFNPVMLVLTSIVGSLILDENLYLGSAIGAVLIMIGLYMVLWGKHKEIQKLPVKITPEIGTVEVAVTPTKVEHDNRSCSSINNNYENNIIDSSSKSCQEEGHIKENNIKETASDDMKSANNTKSEEP* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2784 409 MobiDBLite consensus disorder prediction 375 409 - -
Lja3g2784 409 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Lja3g2784 409 Pfam EamA-like transporter family 12 136 IPR000620 GO:0016020|GO:0016021
Lja3g2784 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 328 - -
Lja3g2784 409 PANTHER WAT1-RELATED PROTEIN 13 334 IPR030184 GO:0016021|GO:0022857
Lja3g2784 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 141 - -
Lja3g2784 409 MobiDBLite consensus disorder prediction 379 394 - -
Lja3g2784 409 PANTHER WAT1-RELATED PROTEIN 13 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2784 Lja-Chr3 41964231 41966058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2784 11 366 Nodulin-like Gene Family AT1G25270 41.226 1.01e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2784 - - lja:Lj0g3v0273439.1 733.791