Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2775 ATGGGAAAGCAATTGCTTTCTTCAGAGCAGTCCTCCAAGCAGGAGAACAATCCAGGATGTATGTGGGGCATGTTTCAAATTCTTGATTACCATCACTGGCATGTCAAAAAGGTGTTTCCTCATAAAAAGAGAAGACAATCCAGATATAAGAGAAAAACCATTTCGCATATCCAAGGTGAAGAAGAAGACCAACAACATGAAGTTGCAGAAGCAGAATCCTTCCTGGTGAAAAGTTCTCCCCAAAACCAGGCCAATAGTGAACATGTACTTCAACTGGAAAAAGATGGCAACACAACAGAAGCTACCATTAACCATAAGCGCGTGGAAACAAACAAACTTAACAGAGGCACTTCCAATAAATTTACGAAGCGTGTTGATGTTATGGAGTTAGTTAGTGAGGAGAAGGATTTGCTACTCAAATTTCTAAGAGACTTAGATGTTAGTGGGAAAACCTCTCATAAAGCTTCCCGCAAGAAAGGAAGATTGATAAAATCAGGGTCATTTCCTTTACCTTCACAGAAGAAAAACTTCAGCTCTAGTACCTTCAAACACAAGCAATATGAAATTTGGACCTTCTCCAAGGGAGAAAAGTTTCATGCTGGTACTGATCAAGCACAAAAAAAGTCTGCATTGAAGGATATTTCTTATGAGGAGCCAACGTCTTCAGTGAGTGATCTTGGCATGGATAGTGCCATGCAACAAAAACGAAGTGTTTCTTCAAGGTCTGCTGAAGGGTTAAATCACAAAGGGTGGAATCAATTGGTCATTCACCAATTCAAAGTTATAAAACAGAAGATAAAACATGCTCTTGTGGAATTCAAATTAAGTAGTCACCAAACTTCTGAGGAAGCAATCGCTGAGAATAATGACAAAGAGATCTCACAAGGCTTAGATGATGGTGTTGTTCATGATTCCAACGAGAATGAAATCTCAAATGAGACTAAACCTTCTGATCATGATTTCAACAAACATGAAGCTCGCCAGATGCGAAGAACACCCTCTCTTAATGAATCGCTGGATAGGTACACTCAGTTGTTTGAGAAAAGCTTCACAAAAGATGTCAAGTGGCATAGGTCAAAGTCTAAAAGCTTAAGATTGACAAATGAGGACAAGATTCACAAGAGTGGACCTGCTCCTATATTTTCGAGAAGCAATATGTCTATGCCTAGTCTTGAGGCCATAGGCTTTATTTTACATGAGGCACTCTTTGATACAAATGAAACAGGTAATAGTACAGTGGAGACTGATGGCCATGTTCAAAGAAAACCAGTTAGCCTTCCTTCAAAGATTACCAAACCACTTGATCATGTAAGAGAGGCTGAAATTGTGGAAACAGTTGAAAGGAATGAAAAAACTGATGGAGTTACCTGTGACCAAAGGGAGGACATGCATGAGCCAGCAGAGGGAGATGAAAGTTTTCTTCAAGAAAAAGAGGAGAAAAGTATGACTACCTATCTTAGCAATGAGGAAATAACATCACTTGAAATTAGTTGTGAAAACAACACAACCAGTAATGCAAAAGGCGGAGAATTTGAGACTGTACCACATAGGGGAAGTGTAGCTTCTTTGCCAGACTCCTTATCCAACACAAATGCTAATGCAATAGCCAAAGACACAAACAAGAGTTCTGACAATCATTTCCTCCTATTCAAATCAGATGAAGAAAAAGACTCCAATTTCCAATATGTGAAAGCTGTTCTCGAATATTCTGGCTTAATGGGAAATGATCAGATTCAAATGCCATACACAGTAGACCAGCCGCTAAAGCCTTCCTTATTCAAGGAATTGGATGCATCTTTGCGCTATGAAATTGAAACCTCTGGAAAAGAGATTACAAAAACCTGTGATTACCAGCTTCTTTTTGACTTGGTTAACGAGGTGCTCCTTGAAATATATGATAGGTCACCATCTTACTTCCCAAGGCCCTTCGACTTCAACCACCACCTCCATTCAATACCTAAAGGGAACTATCTTCTGAATGAAGTGTGGGCTAGTGTTAGCTCATATCTTAGCTTGAGACCGGAGCTGGATCTGATATTAGATGATGTAGTGGGGCGTGATCTGGCGAAAAGAAGTGGCTGGATGAACCTTCAACAGGAAGAGGAGTTTGTAGCACTTGAACTAGAGGATATGATCATTGATGATTTATTAGATGAACTTATCTACTCATCAGATTTGCTTGGACTATGTTGA 2193 0.3963 MGKQLLSSEQSSKQENNPGCMWGMFQILDYHHWHVKKVFPHKKRRQSRYKRKTISHIQGEEEDQQHEVAEAESFLVKSSPQNQANSEHVLQLEKDGNTTEATINHKRVETNKLNRGTSNKFTKRVDVMELVSEEKDLLLKFLRDLDVSGKTSHKASRKKGRLIKSGSFPLPSQKKNFSSSTFKHKQYEIWTFSKGEKFHAGTDQAQKKSALKDISYEEPTSSVSDLGMDSAMQQKRSVSSRSAEGLNHKGWNQLVIHQFKVIKQKIKHALVEFKLSSHQTSEEAIAENNDKEISQGLDDGVVHDSNENEISNETKPSDHDFNKHEARQMRRTPSLNESLDRYTQLFEKSFTKDVKWHRSKSKSLRLTNEDKIHKSGPAPIFSRSNMSMPSLEAIGFILHEALFDTNETGNSTVETDGHVQRKPVSLPSKITKPLDHVREAEIVETVERNEKTDGVTCDQREDMHEPAEGDESFLQEKEEKSMTTYLSNEEITSLEISCENNTTSNAKGGEFETVPHRGSVASLPDSLSNTNANAIAKDTNKSSDNHFLLFKSDEEKDSNFQYVKAVLEYSGLMGNDQIQMPYTVDQPLKPSLFKELDASLRYEIETSGKEITKTCDYQLLFDLVNEVLLEIYDRSPSYFPRPFDFNHHLHSIPKGNYLLNEVWASVSSYLSLRPELDLILDDVVGRDLAKRSGWMNLQQEEEFVALELEDMIIDDLLDELIYSSDLLGLC* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2775 730 MobiDBLite consensus disorder prediction 41 67 - -
Lja3g2775 730 MobiDBLite consensus disorder prediction 303 322 - -
Lja3g2775 730 Pfam Domain of unknown function (DUF4378) 560 719 IPR025486 -
Lja3g2775 730 PANTHER PROTEIN TRM32 1 723 - -
Lja3g2775 730 PANTHER PROTEIN TRM32 1 723 IPR044257 -
Lja3g2775 730 MobiDBLite consensus disorder prediction 53 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2775 Lja-Chr3 41469230 41473340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2775 249 713 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.870 3.80e-40 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2775 - - lja:Lj0g3v0197219.1 1174.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2775 3 41469230 41473340 Lja3g2775 3 41469230 41473340 ECH