Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2771 ATGGTTTCTGCACATCTGCTAGATCTTTGTAACTGCCTCCACAACATGGGAGCTTGTTTGAGTGCTCAAATTAAAGCTGAAAGCCCCAATAACACTGCAGGGTTAAGTTCGAAGAATGTGAGTACAAATGGAAATGATCTCAGCTGCGCAAACAGTAATGGTTCGGCTGCTTCAGTGGCTCAAACTCCGCGTAGTGAGGGTGAGATCTTGCAGTCATCTAATGTAAAGAGCTTTACCTTCATAGAACTTAAGACAGCCACCAGAAACTTCCGTCCAGACAGTGTGTTGGGAGAAGGTGGGTTTGGATCAGTTTTCAAGGGGTGGATTGATGAAAATACATTGGCTGCTGCCAAACCTGGCATTGGCATTGGTATTGCTGTGAAAAGGCTAAATCATGAAAGCTTCCAGGGTCACAGGGAGTGGTTGGCTGAAGTCAACTATCTTGGACAGTTTTCTCATCCACATCTAGTGAAATTGATTGGGTATTGCCTTGAGGATGAACACCGCCTTCTCGTCTATGAATTTATGCCTCGTGGGAGCTTGGAGAATCATTTGTTCAGGAGAGGATCGTATTTTCAACCTCTTTCTTGGAGCCTCCGTGTGAAAGTTGCTCTTGATGCTGCCAAAGGGCTTGCATTTCTGCACAGTGCTGAAACAAAAGTGATATATAGAGATTTTAAGACTTCAAATGTCTTGCTGGATTCAAACTATACTGCAAAGCTTTCTGATTTTGGGCTGGCAAAGGATGGTCCAACAGGTGACAAAAGTCATGTCTCCACCAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTAGCCACTGGTCATCTTACTGCTAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTGCTGGAAATGCTATCTGGTAAGAAGGCAGTGGACAAGAATAGACCATCTGGACAACACAACTTGGTGGAATGGGCTAAACCCTACCTGGCTAACAAGCGTAAGGTTTTCCGAGTGTTGGACAGCCGGCTCGAAGGGCAGTATTCAAGCGATGAGGCCTACAAGGTGGCCACCCTTGCTTTGCGCTGCCTATCAACCGAATCCAAGTTCAGGCCAAACATGGATGAAGTAGTTAAAGCTTTGGAGCAGCTGCAGGTTTCTAAAGTGAAAGGAGGCAATCAAAATGCTTCTGCTAATGGAGCTCGAATGCGTAGAAAAAGTGCTGATGATGTTGGCCGTGTGAGGACCCTGTCATCTTATCCCCGCCCCTCTGCATCCCCTCTCTATACAAACCTTCGAAGTTAA 1278 0.4577 MVSAHLLDLCNCLHNMGACLSAQIKAESPNNTAGLSSKNVSTNGNDLSCANSNGSAASVAQTPRSEGEILQSSNVKSFTFIELKTATRNFRPDSVLGEGGFGSVFKGWIDENTLAAAKPGIGIGIAVKRLNHESFQGHREWLAEVNYLGQFSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRVKVALDAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYTAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGKKAVDKNRPSGQHNLVEWAKPYLANKRKVFRVLDSRLEGQYSSDEAYKVATLALRCLSTESKFRPNMDEVVKALEQLQVSKVKGGNQNASANGARMRRKSADDVGRVRTLSSYPRPSASPLYTNLRS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2771 425 Gene3D Phosphorylase Kinase; domain 1 65 175 - -
Lja3g2771 425 Pfam Protein tyrosine and serine/threonine kinase 94 372 IPR001245 GO:0004672|GO:0006468
Lja3g2771 425 ProSiteProfiles Protein kinase domain profile. 90 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2771 425 PANTHER KINASE 1B 39 390 - -
Lja3g2771 425 Gene3D Transferase(Phosphotransferase) domain 1 176 398 - -
Lja3g2771 425 CDD STKc_IRAK 96 375 - -
Lja3g2771 425 ProSitePatterns Protein kinases ATP-binding region signature. 96 128 IPR017441 GO:0005524
Lja3g2771 425 MobiDBLite consensus disorder prediction 381 403 - -
Lja3g2771 425 PANTHER OS01G0588500 PROTEIN-RELATED 39 390 - -
Lja3g2771 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Lja3g2771 425 SUPERFAMILY Protein kinase-like (PK-like) 67 377 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2771 Lja-Chr3 41381723 41384790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2771 15 372 Glycoside Hydrolase AT3G07070 43.490 2.98e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lja3g2771 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2771 - - gmx:100788856 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2771 3 41381723 41384790 Lja3g0715 3 7148958 7152369 PCT