Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2759 ATGCGAGTTGAGAAGCCTGGGTTGAAACTTGAGAGGCTCCATGGAAGAAGACATGAAGCAGAAGGAAAGGAGACAGAGGAAGGGATGGGGATCCCAGGCGATGAGGATGAAGCGACGAGCGTGGAAAAGGGTGTTGATTTAGAAGAAACAGAGTCAAAACAGAGTGTCACTGGCATCATCGCTGATGCTTTCGTCACTACTTCTCTCCTCGTAGCTCAGAAGCTGAATGTTCCATGGATTGCGGTTTGGGTTCCATTGTCATGCTGTCTATCTGCTCATTTCTACACTAATTTGGTGTGCCAAGAGGTTGGGGGTGGAAACGGTGCAAAATACAGAGCATTGGATTTTCTTCCTGGTTGGTCTAAGATGAAGGGTTCTTTGAGGTCCTGCGGCGGAAAGCACGACGCCGGCGAGAACGACGGTGGTTCTGTGAGATCGACGACGGGAAGGCGCGGTTTCACCGACCAAGAGATGAGTCCTGTCCAAAAGTATGCTCTGAAACCCTCTACTTGGCCTGATTTCAGTGTAGAGTTAGATCCCAAAATGGAGCACCTGCAAGTACCGAGTGATTTTTATGAGAAACATAAAACTGCCTTGGGGGATCGTGTTGTCATTATGGATCCAGTAGGTGGGGAGTTCTCTTTTAGGTTACTTGCTGGGAACTTAGGGGGCTTGATTTTTGAATGTGTTGCTGAATTTTTAAGGAGATATGGCCTGAAAGAAAATCACTTATGTGATTTTTTCTATTTTGGAAAAAACACATTTATTGTGAAGATTTTGGATGGTACCCTGAAAGAAATTAGCTATGGTGTTGGCACTTCCCTAAGCCAACCTATAGTAATTGATGATGGTGATGAGGAGGCTGTGGATGATGAGGATCCAGTGGGAGATGATGAGGATGCTGAAGAAGATGAGGAGGATGATGGAATTATGGAAGTTAGTGAAGGAGAGGAAGAAAATGGTGTGAACAGGGTTCTTCACCCATTTGATAAGGTGATTACTAAATCAGATTCAAAAGGAGATCAGACTTTGTCACTACCCATGATGTATGTTCGGAACCATGTTAGGCCAAATTGGCAGCATGTTGTTCTACAAACCCCGGAGGGTAGAACCTACGCTTGTGAGTTGAAAAGGAGGAATCCAGGAGAGGATGATACTCCTTGCAACATTGGGAAGGATTGGAATAAGTTCGTTAAGGAGAACAAGTTGAAGAGGGGGGACACCGTGCACTTTAGACCAGATAGCGTTGCTAATAATATGATTTACGTTAGTATTATTCGTAGGAAGCAGCGTTGA 1296 0.4498 MRVEKPGLKLERLHGRRHEAEGKETEEGMGIPGDEDEATSVEKGVDLEETESKQSVTGIIADAFVTTSLLVAQKLNVPWIAVWVPLSCCLSAHFYTNLVCQEVGGGNGAKYRALDFLPGWSKMKGSLRSCGGKHDAGENDGGSVRSTTGRRGFTDQEMSPVQKYALKPSTWPDFSVELDPKMEHLQVPSDFYEKHKTALGDRVVIMDPVGGEFSFRLLAGNLGGLIFECVAEFLRRYGLKENHLCDFFYFGKNTFIVKILDGTLKEISYGVGTSLSQPIVIDDGDEEAVDDEDPVGDDEDAEEDEEDDGIMEVSEGEEENGVNRVLHPFDKVITKSDSKGDQTLSLPMMYVRNHVRPNWQHVVLQTPEGRTYACELKRRNPGEDDTPCNIGKDWNKFVKENKLKRGDTVHFRPDSVANNMIYVSIIRRKQR* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2759 431 CDD B3_DNA 329 427 IPR003340 GO:0003677
Lja3g2759 431 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 52 123 - -
Lja3g2759 431 Pfam B3 DNA binding domain 329 428 IPR003340 GO:0003677
Lja3g2759 431 MobiDBLite consensus disorder prediction 131 154 - -
Lja3g2759 431 MobiDBLite consensus disorder prediction 1 42 - -
Lja3g2759 431 MobiDBLite consensus disorder prediction 283 315 - -
Lja3g2759 431 MobiDBLite consensus disorder prediction 280 320 - -
Lja3g2759 431 ProSiteProfiles B3 DNA-binding domain profile. 329 429 IPR003340 GO:0003677
Lja3g2759 431 PANTHER GLYCOSYLTRANSFERASE 39 124 - -
Lja3g2759 431 SUPERFAMILY DNA-binding pseudobarrel domain 183 267 IPR015300 -
Lja3g2759 431 Gene3D - 312 430 IPR015300 -
Lja3g2759 431 Gene3D - 171 263 IPR015300 -
Lja3g2759 431 PANTHER FLAVONOID GLUCOSYLTRANSFERASE 39 124 - -
Lja3g2759 431 SUPERFAMILY DNA-binding pseudobarrel domain 328 428 IPR015300 -
Lja3g2759 431 Gene3D Glycogen Phosphorylase B; 39 129 - -
Lja3g2759 431 SMART B3_2 174 263 IPR003340 GO:0003677
Lja3g2759 431 SMART B3_2 329 429 IPR003340 GO:0003677
Lja3g2759 431 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2759 Lja-Chr3 40830747 40838789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2759 49 119 Glycosyltransferase AT1G30530 33.803 7.05e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lja3g2759 B3 1.4e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2759 - K12930 lja:Lj3g3v1666020.1 509.605