Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2736 ATGGAGTACTCACTGGAATCTTTGGAGAAAGTTCTGAAGAGCATGAGGAAGTATTATGGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCACAGCTTAAAGGGTTGCATAATTTCCTCATGGAAAGAGAGGATGAAATCTTCAAGGCCCTCAAGCAGGATTTAGGGAAACATCAAGTTGAGGCTTTTAGAGATGAGATTGGAACTTTAATCAAGTCCTTGAATTTGGCAACAAAGTCTCTCAAAAAATGGATGGAAGGCAAAGAGGCTAAACTGCCCAAAATAGCACTACTCTCCAGTGCAGAAATTGTTCCTGAGCCTCTTGGTCTTGTTCTCATAATCTCATCATGGAATTTTCCTTTTGGACTGTCCTTGGAGCCACTGATTGGAGCTGTAGCAGCTGGAAACATTGTGGTTCTGAAGCCTTCAGAGATTTCCCCTGCTTGTTCCACTCTTCTAGCCAATGTCCTTCCAACTTACTTGGATGGTAATGCCATTAAGGTCGTCCATGGTGGACCAGAAGTGGGCGAGCAACTCCTCAAACAAAGATGGGATAAGATATTTTTCACAGGAAGTGCTCGGGTGGGGAGGATTGTTATGTCTGCAGCAGTGGAGCATCTGACACCTGTGACTTTGGAATTAGGTGGAAAATGTCCAGCATTAATTGATTCCCTTGCAGCTTCTTGGGACAGAGAGGTGGCTGTGAAGCGAATTTTGGTGGCAAAATATGGGGCTTGTGCAGGACAAGCATGCATATCAATCGATTATATCCTCGTAGAAAAGAGTTTCAGTTCTATATTGGTGGGATTAATGAAAGTATGGATCAAGAAAATGTTTGGTGAAAACCCAAAAGCATCCAACACAATTGCAAGGATTGTTAATAAAGAACATTTTTTGAGACTCAAGCATCTTCTCACTGATCCTGAGATCAAAGAATCAGTGGTTTTTGGTGGTTCATTGGATGAAGATGACTTGTTTATTGAGCCAACAATACTATTGGATCCGCCACTTGAATCAGCAATCATGTCAGAAGAAATCTTTGGTCCCCTGCTTCCAATCATCACTGTAGAGAAGATTGAAGACAGTATTGAATTCATATCATCAAGGCCAAAACCTCTAGCAATTTATGCCTTTACAAAAAACAAAACTCTGCAGTATGCAGCTGATACTCTCCCATTTGGAGGAGTTGGTGAATGTGGATTTGGCAAGTACCACGGGAAGTTCTCCTTTGATGCGTTCAGCCACCATAAGGCTGTTGCAAGAAGAAGCTTCTACACTGATTTTTGGTTCAGATTTCCTCCATGGAATCTTAACAAGCTCCAACTACTGGAGGTAGCTTACAATTTGGACTATCTTGGAATGCTTCTTGTCCTGCTCGGCTTAAAGAGATCAAAACGCTCATTATTTCAGGCTTGTTGA 1422 0.4191 MEYSLESLEKVLKSMRKYYGSGKTKEASWRESQLKGLHNFLMEREDEIFKALKQDLGKHQVEAFRDEIGTLIKSLNLATKSLKKWMEGKEAKLPKIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNIVVLKPSEISPACSTLLANVLPTYLDGNAIKVVHGGPEVGEQLLKQRWDKIFFTGSARVGRIVMSAAVEHLTPVTLELGGKCPALIDSLAASWDREVAVKRILVAKYGACAGQACISIDYILVEKSFSSILVGLMKVWIKKMFGENPKASNTIARIVNKEHFLRLKHLLTDPEIKESVVFGGSLDEDDLFIEPTILLDPPLESAIMSEEIFGPLLPIITVEKIEDSIEFISSRPKPLAIYAFTKNKTLQYAADTLPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSFYTDFWFRFPPWNLNKLQLLEVAYNLDYLGMLLVLLGLKRSKRSLFQAC* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2736 473 PANTHER ALDEHYDE DEHYDROGENASE 385 471 - -
Lja3g2736 473 PIRSF ALDH 1 456 IPR012394 GO:0006081
Lja3g2736 473 PANTHER ALDEHYDE DEHYDROGENASE 8 386 - -
Lja3g2736 473 Pfam Aldehyde dehydrogenase family 6 383 IPR015590 GO:0016491
Lja3g2736 473 PANTHER ALDEHYDE DEHYDROGENASE 385 471 IPR012394 GO:0006081
Lja3g2736 473 PANTHER ALDEHYDE DEHYDROGENASE 8 386 IPR012394 GO:0006081
Lja3g2736 473 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 384 IPR016163 GO:0016620
Lja3g2736 473 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 216 IPR016162 GO:0016491
Lja3g2736 473 SUPERFAMILY ALDH-like 9 437 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2736 Lja-Chr3 40349159 40353546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2736 1 464 Aldehyde Dehydrogenase Gene Family AT4G36250 51.653 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2736 K00128 - gmx:100819197 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2736 3 40349159 40353546 Lja3g2736 3 40349159 40353546 ECH