Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2734 ATGAAGAAATTGAGGAATAGCATGACATTCAAAGCTGCTCCAATGCCACGTTTCTATAAGGAACCACCTCCCAAGGTTGAGCTTAAGAAGGCTGAGAACAGGAAACTGAATGCAGCAATGAACAAGTTGTTTATGGAGGAAAATGATCAGTTGCAGAAACAGCCTTCATCAGCTGGAACTACTGATGGCAATGGTGATTCAGCAGCTACTCCTCCTAGGAATTCTATGAAAGATGCTGATAGTCCTGCTGGCCAAGGGCAGCGAATTGTGCAACACCATCAGGTCTTTCCAGAGTTTGATGAAATCCGCGAGGAGAATAAACAAAAACACCTTATTTGGTCCTTTGGGGAAGTTTTAAAATCTACACAGGAAGCCATAGTGTTGTCACCATTTGTTGCTTTGGCTCATTGGCTCTCCATCCAAGACCTGGTGTTTAGAACCTTGGCTACTCCTCGGAATTCTATGGAGTGGCTGCTGCCAGCCCGAGCCTGTGGCTTGGTTAGTTTAGAACCTAATAAGATTGAAGAGATTGTAAAAGATCTTCTGAACTGTTTGAAGAGTGTCAAAGTAAGTACTTGGGGAAGCAAGCCAGTGCTAGAGAAATGGAGAAGAGGGAGTTAA 621 0.4396 MKKLRNSMTFKAAPMPRFYKEPPPKVELKKAENRKLNAAMNKLFMEENDQLQKQPSSAGTTDGNGDSAATPPRNSMKDADSPAGQGQRIVQHHQVFPEFDEIREENKQKHLIWSFGEVLKSTQEAIVLSPFVALAHWLSIQDLVFRTLATPRNSMEWLLPARACGLVSLEPNKIEEIVKDLLNCLKSVKVSTWGSKPVLEKWRRGS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2734 206 MobiDBLite consensus disorder prediction 47 71 - -
Lja3g2734 206 Pfam Sucrose synthase 84 142 IPR000368 GO:0005985|GO:0016157
Lja3g2734 206 Gene3D - 80 147 - -
Lja3g2734 206 MobiDBLite consensus disorder prediction 22 36 - -
Lja3g2734 206 MobiDBLite consensus disorder prediction 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2734 Lja-Chr3 40282928 40289128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2734 33 180 Homeobox Transcription Factor Family AT5G60690 36.025 2.17e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2734 - K00695 gmx:100788584 68.1662