Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2702 ATGGAGAACAGATCAAGAGGGAGAGGCAAAGCGAAGGAGGAGGCAGGCCAAGGCAATCGTCAAGTTCTTGGAGACATTGGTAATTTGGAGGTGCTTAGAAATGCTGAAGGGAAGCAGATTTCACGGCCCATCACAAGGTTTTCAAATTCTCGTCCGTTTGCATTGAGGAACTTTCACACAAAATTGTTGGCAAGTGCACAAGCTGCAGCAAACCTGGTAGTACAAGCTAATGAGCAAGGAACTCCACTAGGGAAGAAACGTGTTATTGTAACTACACTGGACAATGGAGGAATTGTTCACAAGCAAAGTGGTGTACAAGATTTGACACAGAAGCCAAATCCTGATCCTGTAGACATGGTTAGTTCTGATGATTTTGTTTGTGAAATGAAGTGTGAAATATCTAGAAGGAATGTCCAGACTCTGAGCTCAACGCTTAATGCACAAAGCAAGGCTGCTAGCGGAGTCGTGGCCGAGCCTGCGGATCAGCCAGTTGAAATCGATGCAGAAAATGCTGACAATGAACTTGCAGTAATTGAATACCTCGACGAGCTATACAAATTCTATAAACAAACAGAAGGTGACAGCAGAGTTTCAGATTACATGAAATCACAGCATGAGATTAATGAGAAGATGAGGTCTATTACTGTTGATTGGCTGCTTGAGGTCCATAACAGATTCAAATTAATGCCGGAGACACTCTACCTTACCATAAACATACTTGATCGATACCTCTCATCGACGGACATACCGAAAAAAGAATTACAGTTAGTGGGCATAAGCTCAATGCTCATAGCTTGCAAATATGAAGAGATATACCCTCCTCAGATGATTGACTTAGTTAGCATATCAAATGATGCTTACACCAAACATCAAATTCATTCCATGGAGAGATCAATTCTTGAGAAGTTACAATGGTATTTAACAGTTCCCACACCTTATGTCTTTCTAGTCAGACTAAGCAGTGTTCAGCCAGATAAACAGATGGAGAACCTGGCTTTTTTCCTCGCCGAACTCACTCTTGAGCACTACCAAGCAATTGTTTCATACTCTCCTTCAACGATTGCGGCATCAGCAATCTACGCTGCTCGCTGCACCCTCAACCGGCGTCCATTCTGGAGCGAAACGCTCAAGCGCCTATCCAGCTACTGCACAGAACAGATAATAGAATGTGCTAAGCTATTAGTCAGTTTACAAACAAGCGCCGCAGATTCAAAACCTAACGCACTGTACTGGAAATTCTCAAGCGAAGACAAAGGTTTCGTTGCTCTTCTACCTCCAACCAAAAACATAGAGAATCAATTACTCATGTAA 1311 0.4272 MENRSRGRGKAKEEAGQGNRQVLGDIGNLEVLRNAEGKQISRPITRFSNSRPFALRNFHTKLLASAQAAANLVVQANEQGTPLGKKRVIVTTLDNGGIVHKQSGVQDLTQKPNPDPVDMVSSDDFVCEMKCEISRRNVQTLSSTLNAQSKAASGVVAEPADQPVEIDAENADNELAVIEYLDELYKFYKQTEGDSRVSDYMKSQHEINEKMRSITVDWLLEVHNRFKLMPETLYLTINILDRYLSSTDIPKKELQLVGISSMLIACKYEEIYPPQMIDLVSISNDAYTKHQIHSMERSILEKLQWYLTVPTPYVFLVRLSSVQPDKQMENLAFFLAELTLEHYQAIVSYSPSTIAASAIYAARCTLNRRPFWSETLKRLSSYCTEQIIECAKLLVSLQTSAADSKPNALYWKFSSEDKGFVALLPPTKNIENQLLM* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2702 436 Gene3D - 302 434 - -
Lja3g2702 436 MobiDBLite consensus disorder prediction 1 20 - -
Lja3g2702 436 CDD CYCLIN 211 300 IPR013763 -
Lja3g2702 436 MobiDBLite consensus disorder prediction 1 15 - -
Lja3g2702 436 Pfam Cyclin, C-terminal domain 310 426 IPR004367 -
Lja3g2702 436 Gene3D - 197 301 - -
Lja3g2702 436 SUPERFAMILY Cyclin-like 172 307 IPR036915 -
Lja3g2702 436 SUPERFAMILY Cyclin-like 309 429 IPR036915 -
Lja3g2702 436 SMART Cyclin_C_2 310 427 IPR004367 -
Lja3g2702 436 CDD CYCLIN 308 395 IPR013763 -
Lja3g2702 436 PANTHER CYCLIN-B1-4 14 429 - -
Lja3g2702 436 PIRSF Cyclin_A_B_D_E 1 435 IPR039361 -
Lja3g2702 436 Pfam Cyclin, N-terminal domain 184 307 IPR006671 -
Lja3g2702 436 PANTHER CYCLINS 14 429 IPR039361 -
Lja3g2702 436 SMART cyclin_7 314 396 IPR013763 -
Lja3g2702 436 SMART cyclin_7 217 301 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2702 Lja-Chr3 39131007 39135097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2702 136 425 Core Cell Cycle Gene Families AT2G26760 51.712 1.88e-105 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2702 K21777 - jre:109013760 412.92