Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2691 ATGGATCCAGAAAGATCAATGGAGGACCAATTCTCCAAGCTACATCCTTCCTTGCCAGTAAGCACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTGGCCAGGCTTGGTTATAATAATATCACCGTCTTGGAGAAACACCATACAGTTGGTGGCATGTGTGAATCGGTTGACTTTGAAGGAAAAGTTTATGATCTGGGTGGACAAGTTCTGGCAGCAAGCAGTGCTCCAGTTATCTTTCACTTGGCAAAAGAGACAGGGTCAGCACTAGAAGAAATGGACTCACACAAGCTTGCTGTTATTGACTGTTCCTCAGGACAATATCAAGATATTAAAGTTGCTGATGATTATGTGTCTGTTATGTCACTCACCTTGAACATCCAAGAAAAGGTGAAGAATTCTGGTCATTTTGGGGTCCATGCTGTCAGTGAAATTGCTTCAGACTTAACTCCAGTGTATCTTCAACATCATGGACTCAAATCCATTCCTAAATCTGTGGCTTATGGTTACACAGCTTCAGGATATGGGTTTACTCAAGATATGCCTTATGCCTACATTCATGAATTTACCAGAACATCCATGGCAGGGAAAATTCGACGATTCAAAGGTGGATATACAAGTCTTTGGCAGAGGATTGTTGAATCACTTCCTGTGAAACTTCACTGTAACGCTGAAGTGTCGGCCATCAGAAGGAGTTCCGACAGTGTCACTGTTAATGTCAAGAGCTCAAATGAAGTTGAGTCTATGGAGTTTGATAAGATCATAATCTCTGGTAACTTTCCACTAAAATATGGAAGAACTTACAGATCAGTGCCTTCAACTTGTATAGAATCTGAAGCAGAAGTAATGGATGCAAGTGACCTTGAGAAGGAATTGTTTAGCAAAGTAGAGACAAATGACTACTACACCACTGTTTTCAAGATCAAAGGGCTGGAACACATGCCAGTTGGATTTTATTATTTCAGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAAAAGTTTTATGCTGACACTGATGTATTCCTGTTCTGGTCCTATGGCAACTCTGTTGATATTAAGGGTCCAACAGTCACTGAGCTTGCAATCAAGGCAATAGAAGCCATTGGGGGAGAAGTTGAGAGTTTCATTCTTCAACGTCGCTTTAAGTATTTTCCTCACGTTAGCAGCCAAGACATGAAAAATGGATTCTATGGAAAGTTGGAATCAGAGCTTCAAGGTTCAAGGAATACTTATTATGTCGGTGGGCTTATGGCATTTGAGCTCACAGAGAGAAATTCATCTTATGCCATGGCTATGGTCTGCAAGAACTTTGCAAATAGCAGTGATTTGCCAGTGTTTCCTTATACCAAGAGTTTGTTCCCTTTGCAAACCGAGTTCCAGAAAAAGGAGCCTCCAGAACTTCATGAATTGCCTGGAGTGAAATTTCCCAATTTGCCTACTTTGAATAGCTATTTAAAACATTGGGGAACTCATCCAGTCACTGAAAATAGAACTCTTTATTCATGGATAAATGAAGAAGGGACAGTAACAGGCAAGAGGACATATAGAGAACAACACTTAAATGCTTCTTGCATTGCACATAAGCTCTTATCAAGCCAAAAGCCAATGATCAAGCCTGGTGACAGGGTCCTCCTTGTCTATGTTCCTGGTCTGGATTTCATTGATGCTTTCTTTGGATGCCTAAGAGCTAAAGTTCTACCAGTCCCAGTTATTCCCCCAGATCCCATGCAAAGAGGTGGACAAGCACTTCAGAAAATTGAGAATATTGCCAAGTCATGTGGCATAGTGGCAATTTTATCAACAGTAGCTTACCACTCAGCAGTTCGCGTGGGTTTAGTGAAAACTTTTATGTCACTGACTGGGAAAAATGGAAAATCCTCAGCTAGATGGCCAAATCTTCCATGGCTGCACACTGATTCTTGGGTCAATAGCTCAAAATGTTCTGATATGGAAGGTCTAGATGATCAATGTGAATCGAAGCCTGCTGACATAAGTTTCTTACAATTTACCTCAGGCTCAACCGGTGATGCTAAAGGAGTCATGATTACCCATGGAGGGCTTATTCACAATGTGAAGCTGATGAGAAGTAGATACAAGAGCACCTCAAGGACAGTGCTAGTGAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTCACAGCTCTTGTTAGTGGTGGAACTGCATTCTTGTTTTCACCAATGACATTTATCAAGAAACCACTCTTGTGGCTTGAAATCATCAGCAAATATCAAGCAACTCATAGTGCTGGCCCTAACTTTGCTTTTGAGTTGGTGGTTAGAAGGTTAGAGTCTGAAAAGGATAAGCTTCAGAGTTTTGACCTTTCTTCCATGGTTTTTATCATGGTTGCTGCTGAACCAGTGAGACAGAAGACCCTGAAAAGGTTTCTTGATCTAACCAGACCTTTTGGGTTTTCTGAAAAAGTGATGGCTCCTGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGCAATCCTATTCTCGTTGATTGGCAGGGAAGAGTTTGTTGTGGATATATTCACCCGGGTGACGCAGATATTGACATCAGAATAGCTGATCCAGAGCTCGGTGAAGAGCTTCAGGAAGATGGAAAGGAAGGAGAAATTTGGATCAGTAGTCCAAGTGCAGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACATTCAAGAATGAGCTCAAGAACCACCCCGGACGTATCTACACAAGAACTGGAGACTTGGGAAGAATCATAGATGGAAAGCTATTCATCACTGGAAGGATCAAGGATCTTATCATCGTTGCTGGAAGAAACATCTACTCCTCAGATGTTGAAAAGACGGTGGAGAGTTCATCTGAATTTATTCGTCCTGGATGCTGTGCTGTAATTGGAGTCTCTGAAGAAATCTTATCAGCAAAGGGGGTTCCTTTGCCAGATGGCTCTGACCAGGTTGGTTTGGTTGTGATTGCAGAACTGAGGGATGGTAAACCGGTTAACAAAGATGTGATTGAGCATATTCAGACTCGTGTGGTAGAAGAACATGGAGTCAGTATTGCTTCTGTCAAGCTGATCAAGCCTAGAACAATCAGCAAAACTACCTCAGGCAAAATCAAAAGATTTGAATGTCTCAAACAGTTCGCAGATGGAACACTAAACTTGGTATCACAGCCTACTTTGTCAAAAAAAACACTGGTAAGGTCATATACTACAGGAACATGTACAGAAGGAAGAACACCAAGGGCTCAGCTAGTGAGAAGTACAACACTTCTACCTAGTCCGTGTATCGGTAACAAGGAAATTGTGGAGTTCTTGAAAAGGCTTATTTCTGAACAGGCTGGAATCTCTATCAGCAACATCTCAGTCACGGACAACATGTCAACCTATGGAATGGATTCAATTGGTGTGGTCAAAGCAACTCAAAAACTCTCAGATTTCCTAGGAGTGCCAGTTGCTGCTATAGATGTTTTCACCGCATCCAGCATTCAAGAACTAGCAAACTTCTCAGAGAATCTTCTATTGAAGTCTCAACCTCAACTTATGAGCAATCCATCCCATGTTGAAGAAGCTGAAACTGATTCTACTGAATTTGTTGTTGATGTGACCAAGTCTCGCCAATGGGGTATCCATTTTCTTCAACTCCTAGCACTCATTTACATTTCCATCATGCTGGTCTCACCTGCTTATCTGTCCATCACTGCTTTTGTAAGCTTCATTACAAATGTTAGTCAACCAGTATATGGGTTCCCCTGGTTAAATTATCTGATTTCACTGACTTTGGCACCCTTTTCTTGGATCCTTTGCATTGCTTCTACTTGCGTTTGCATTTCATTTTTTGGTAATACTTTCTTGAGGCCAAACTATGCCCTTACCCCTGAAATATCCATATATTCAATGGATTTTGTCAAGTGGTGGGCGCTTTATAAAACCCAGGAAATCTCCTCAAAAGTTCTGGCAACACACCTCAAAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGAGCAAGAATTGGATCATCAGTTTTGCTTGACACAGTTGACATCACCGACCCGTCTCTGGTTTCAATTGGAGATGAAGTTGTCATTGCCGAAGGAGCTTTGGTTCAAAGCCATGAGGTGAAGAATGGACTTCTAAGTTTCCTTCCAATTAGGATCGGCAAAAATTCTTCAATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTATTAGAGAAGGAGCTGAGGTACAACCCCTGCAAAAGGTTGAAGGAGGCCAACATGTGCTCAAACCTGCCAAGCTTAATAATGTTAAAGAGAATACAGGGCTTCCTGTTACTACCAGCAAAACTCAGTCTGATGCCATGTACCACTTTTTGGGGATCTACCTTGTTGGCTTTCTCAGCTCCCTTGCTGCAGCTATTGCTTACTTCCTATATATAAGATTCTTCCAGAAACCTGCATCATTCCAACAATTTTCATTTGTTTGCATATGTGGGACTTTCCACTGGATCCCATTTACCATAATTGCCTATGCAACCATGTTTTCTAATATAACATCAAATCCCATTGCCTTCACCATTTTATTTACCTGCGCATACTTGCTTCATGGTCTCATACTCATCTCTCTCACCTGTGCCTTGACTCGTTTGCTCAAACTTGGTCAAAAGCAAACCCACTTTAAAACCTGGCTTCGAAATCAATTAACCCTTTCCTGCCACCTTAGATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATCTACGCCTTTTGGGTGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAATCCAGTTTCAAACCCAGAGCTTATGTCAATTGGTCATGGTGTCCATCTTGGTGATTTTAGCCGCATAATCACTGGTTTCCATTATTCCAATGGATATGCTTGTGGGAAGATAGAGGTTCAGGAGAATTCAGTTGCTGGGAGTCAAAGCCTAATCCTCCCTGGTTCTCTTGTAGAAAAGAATGTCATGCTTGGTGCACTTTCAGTTGCTCCAATGAACTCCATACTTCATGAGGGTAGCGTGTACATTGGATCTCAAACCAGAATCTCTACAAGGAACTCGGGAAGTAATTTGGATGAACGGATCGAGGAGATGGACATGGGATACAAGAAAGTGGTTGGAAATTTGGCTGCAAATTTGGCTGTCACAACAATGAATGCTAAAGCAAGATACTTCCATCGCATTGGTGTAAGTGGAAAGGGGCACTTGAAAATATATGACAAACTTGAAGGTGTTCCACAGCACAAGATTTTTCACCCTGGAAAAAGCTACCCTGTCATGGTACGTCACAGCAATAGCTTAAGTGCTGATGATGATGCCAGGATTGATGCACGTGGCGCAGCTTTGAGGATACTTTCTGATGAACCCAGTTCTCACCCTCCTATCATTGATTTGACACTGAAAACAGGCAAGGCATTCTATGCACGCACCCTTGGTGATTTTGCAACTTGGCTTGTGTGTGGACTTGCTGCGAGGGAAGAGATGGTCAAGTTAGCCCCACATGTTCGTGAAGCCGTGTGGACTTCCCTTCGGAATGGTGACTCATATGCTGAATTGCATTACCACTCAAACATTTGCAGGCTCATGCGGTTCCAGAATGGACAGGAAATGTATGTCAAATTCAAGTTAAGGCCTCATGACACAAGTATCACTGAGGATACAGGTAAGGTTGAGCCAACTGGGATTCTTCCACCAGAGACAGGTGCAATTCCAAGGGATGAAAAGGACACGCGTCCTTTGCTATTCCTTGCTGATGATTTTCAAAAGCGAGTGAATTCCCCCGGTGGAGTTCGCTATGTTTTCCAGGTGCAGCTTCAACCAGTGCCAGATGATGAATCCACACGTGATGCTGCACTTGACTGCACCAAACCATGGGATGAAAAAGAGTTCCCTTACATTGATGTTGGAGAGATTAACATCACTGAAAATCTTTCCAGAGAAGAGTCAGAGAAACTTGAGTTCAATCCTTATCTCAGAAGCCATGAGTTAGATGTCGTCCCTGCTAACTCCATCACACAGAGTGCTTCAATTGATCATGGTCGTTCATTGATCTACGAGATTTGCCAGCACGTGCGTAACAGACAGCCACTCCCAGAATCCTGGAGAAACCTCGTACAGCAATCCAACGTGAAGGTAGACCTGTCCTGTTGTCCAATGGCAGCAGCAGCAGCATCATCAGCAGCAGCATTGCCTGAAAAGGAACCGTTGCTAAAAAAAGTAACCTTGACAAGAACCAGGTCCCAAATTTTCTCAGGGCTTTTCACTCAGCCATTTCTACAAACAGCTTTACCGCACATGGTGGTGGGTTTAGCAATTTATGCTCCTCTGAACTTGGTTCTTTACCTTAACAATGTGAAGAATCTCCCACTGCATTGGCTGCTTCCCCTGTTCTGGATTCTCTCAGGTTTCATGGCTGCACTAGCATGTGTTGCAGCCAAATGGGTTTTCGTGGGGAAGAAGAAAGCTGGTGAAACAGTACCCATTTGGAGCAAAAGGGTCCTCATGGATAGCACATGGCAAGCCATTAGAACCGTAATTGGAGACTTTTTCATGGACATGACAAGTGGGTCGTTTTGGTTTGTACTATGGATGAAGCTGATGGGTGCAGACATTGACATGGATCGTGCAGGGTATGTGGATAGCATGGGAGCTTTGTTGAACCCTGAAATGGTGAAGATTGAGAGTGGGGGGTGTGTGGGAAGAGAAGCTTTGTTGCTTGGACACATTTATGAAGGTGAAGGAATGGTGAAGTTTGGAGAGATCAAAATTGGTGAAGATGGGTTTGTAGGGAGTAGAGCTGTGGTCATGCCTGGTGTGGAAGTGGAAAGTGAGGCTAATCTTGGTGCCTTGTCTCTTGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA 6981 0.4287 MDPERSMEDQFSKLHPSLPVSTRIGIVGAGPSGLSAAYALARLGYNNITVLEKHHTVGGMCESVDFEGKVYDLGGQVLAASSAPVIFHLAKETGSALEEMDSHKLAVIDCSSGQYQDIKVADDYVSVMSLTLNIQEKVKNSGHFGVHAVSEIASDLTPVYLQHHGLKSIPKSVAYGYTASGYGFTQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIVESLPVKLHCNAEVSAIRRSSDSVTVNVKSSNEVESMEFDKIIISGNFPLKYGRTYRSVPSTCIESEAEVMDASDLEKELFSKVETNDYYTTVFKIKGLEHMPVGFYYFSEYMEDPSTIGNPVAMQKFYADTDVFLFWSYGNSVDIKGPTVTELAIKAIEAIGGEVESFILQRRFKYFPHVSSQDMKNGFYGKLESELQGSRNTYYVGGLMAFELTERNSSYAMAMVCKNFANSSDLPVFPYTKSLFPLQTEFQKKEPPELHELPGVKFPNLPTLNSYLKHWGTHPVTENRTLYSWINEEGTVTGKRTYREQHLNASCIAHKLLSSQKPMIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVIPPDPMQRGGQALQKIENIAKSCGIVAILSTVAYHSAVRVGLVKTFMSLTGKNGKSSARWPNLPWLHTDSWVNSSKCSDMEGLDDQCESKPADISFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGTAFLFSPMTFIKKPLLWLEIISKYQATHSAGPNFAFELVVRRLESEKDKLQSFDLSSMVFIMVAAEPVRQKTLKRFLDLTRPFGFSEKVMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYIHPGDADIDIRIADPELGEELQEDGKEGEIWISSPSAGIGYWGKEELSQKTFKNELKNHPGRIYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSEFIRPGCCAVIGVSEEILSAKGVPLPDGSDQVGLVVIAELRDGKPVNKDVIEHIQTRVVEEHGVSIASVKLIKPRTISKTTSGKIKRFECLKQFADGTLNLVSQPTLSKKTLVRSYTTGTCTEGRTPRAQLVRSTTLLPSPCIGNKEIVEFLKRLISEQAGISISNISVTDNMSTYGMDSIGVVKATQKLSDFLGVPVAAIDVFTASSIQELANFSENLLLKSQPQLMSNPSHVEEAETDSTEFVVDVTKSRQWGIHFLQLLALIYISIMLVSPAYLSITAFVSFITNVSQPVYGFPWLNYLISLTLAPFSWILCIASTCVCISFFGNTFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLKGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEVVIAEGALVQSHEVKNGLLSFLPIRIGKNSSIGPYAVIQKGSVIREGAEVQPLQKVEGGQHVLKPAKLNNVKENTGLPVTTSKTQSDAMYHFLGIYLVGFLSSLAAAIAYFLYIRFFQKPASFQQFSFVCICGTFHWIPFTIIAYATMFSNITSNPIAFTILFTCAYLLHGLILISLTCALTRLLKLGQKQTHFKTWLRNQLTLSCHLRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGHGVHLGDFSRIITGFHYSNGYACGKIEVQENSVAGSQSLILPGSLVEKNVMLGALSVAPMNSILHEGSVYIGSQTRISTRNSGSNLDERIEEMDMGYKKVVGNLAANLAVTTMNAKARYFHRIGVSGKGHLKIYDKLEGVPQHKIFHPGKSYPVMVRHSNSLSADDDARIDARGAALRILSDEPSSHPPIIDLTLKTGKAFYARTLGDFATWLVCGLAAREEMVKLAPHVREAVWTSLRNGDSYAELHYHSNICRLMRFQNGQEMYVKFKLRPHDTSITEDTGKVEPTGILPPETGAIPRDEKDTRPLLFLADDFQKRVNSPGGVRYVFQVQLQPVPDDESTRDAALDCTKPWDEKEFPYIDVGEINITENLSREESEKLEFNPYLRSHELDVVPANSITQSASIDHGRSLIYEICQHVRNRQPLPESWRNLVQQSNVKVDLSCCPMAAAAASSAAALPEKEPLLKKVTLTRTRSQIFSGLFTQPFLQTALPHMVVGLAIYAPLNLVLYLNNVKNLPLHWLLPLFWILSGFMAALACVAAKWVFVGKKKAGETVPIWSKRVLMDSTWQAIRTVIGDFFMDMTSGSFWFVLWMKLMGADIDMDRAGYVDSMGALLNPEMVKIESGGCVGREALLLGHIYEGEGMVKFGEIKIGEDGFVGSRAVVMPGVEVESEANLGALSLAMKGEIVRSR* 2327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2691 2326 SUPERFAMILY Trimeric LpxA-like enzymes 1606 1716 IPR011004 -
Lja3g2691 2326 ProSiteProfiles catalase family profile. 1711 2326 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lja3g2691 2326 Gene3D - 480 952 IPR042099 -
Lja3g2691 2326 Gene3D - 1117 1195 IPR036736 -
Lja3g2691 2326 CDD FAAL 506 1072 IPR040097 GO:0008610
Lja3g2691 2326 PANTHER AMP-BINDING ENZYME 1 2326 - -
Lja3g2691 2326 Gene3D - 94 202 - -
Lja3g2691 2326 PRINTS Adrenodoxin reductase family signature 47 60 - -
Lja3g2691 2326 PRINTS Adrenodoxin reductase family signature 23 45 - -
Lja3g2691 2326 ProSiteProfiles Carrier protein (CP) domain profile. 1122 1196 IPR009081 -
Lja3g2691 2326 SUPERFAMILY Trimeric LpxA-like enzymes 1345 1443 IPR011004 -
Lja3g2691 2326 ProSitePatterns Phosphopantetheine attachment site. 1151 1166 IPR006162 -
Lja3g2691 2326 Gene3D - 303 396 - -
Lja3g2691 2326 SUPERFAMILY Acetyl-CoA synthetase-like 493 1088 - -
Lja3g2691 2326 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Lja3g2691 2326 Gene3D Hexapeptide repeat proteins 1358 1469 - -
Lja3g2691 2326 MobiDBLite consensus disorder prediction 1914 1934 - -
Lja3g2691 2326 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
Lja3g2691 2326 Gene3D - 23 446 IPR036188 -
Lja3g2691 2326 Pfam AMP-binding enzyme 524 958 IPR000873 -
Lja3g2691 2326 SUPERFAMILY Trimeric LpxA-like enzymes 2178 2323 IPR011004 -
Lja3g2691 2326 Gene3D Hexapeptide repeat proteins 1600 1717 - -
Lja3g2691 2326 PANTHER AMINE OXIDASE 1 2326 - -
Lja3g2691 2326 Gene3D Catalase core domain 1718 2065 - -
Lja3g2691 2326 SUPERFAMILY Heme-dependent catalase-like 1690 2057 IPR020835 GO:0020037
Lja3g2691 2326 Pfam Phosphopantetheine attachment site 1127 1191 IPR009081 -
Lja3g2691 2326 SUPERFAMILY FAD/NAD(P)-binding domain 22 271 IPR036188 -
Lja3g2691 2326 Gene3D - 953 1090 IPR045851 -
Lja3g2691 2326 SUPERFAMILY ACP-like 1122 1202 IPR036736 -
Lja3g2691 2326 SMART Phosphopantetheine attachment site 1125 1196 IPR020806 GO:0031177
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2691 Lja-Chr3 38878914 38886774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2691 676 1003 Monolignol Biosynthesis Gene Families AT1G20480 25.228 5.53e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2691 - - cam:101501314 3908.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2691 3 38878914 38886774 Lja3g2691 3 38878914 38886774 ECH
Lja3g2691 3 38878914 38886774 Lja3g0623 3 6214392 6220467 PCT