Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2667 ATGAACCACCATTACTGCCAGGGATTTGATTCAGATTATAGTGACCTTGTTATGCAAGCAGAAATCAGTGAGAAACATGAGAAAGAAGATGAGTTTTCAGAAAAATTAGATTCGTGTGCAGATGAAGATGAAAAGGATGTCGAACAACCCATAGCAGGCACAGAAGCTTTAGAACCATTTGCAGGCATGGAGTTCAATTCTAGAGAAGAAGCCAGAGAATTCTACATTGCCTATGGTAGACGGATGGGATTTACAGTACGAATACACCATAACCGCCGTTCCCGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTTTGCTCAAAACAAGGCTTTCGTGCAACAAAATATGTGCACAGAAAAGATAGAGTGCTCCCTCCTCCTCCAGCCACCCGAGAAGGCTGTTTGGCCATGATAAGGTTGGCTTTACGGGATGGAGGGACGTGGGTTGTCACCAAATTTGTGAAGGAGCATACTCATAAACTGATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGAGAAGCACTTGGTTAGTGAGGATGAGAAAGATAAGAGAATCCGAGAGCTATCGCTCGAGCTACACAACGAAAGACAGAAGTGGAAACGCCGTTGTGCTGTATATGAAGAACAGTTAAATATGGTTCTGAACGATTTAGAGAAGCACACAGAGTACATCTCTCAAAAAGTTGCTGATATAGTCCGAAGTATAAGAGAGATTGAGGAGGAAAAATCAGATTCAGATGGCAGGTAA 753 0.4263 MNHHYCQGFDSDYSDLVMQAEISEKHEKEDEFSEKLDSCADEDEKDVEQPIAGTEALEPFAGMEFNSREEAREFYIAYGRRMGFTVRIHHNRRSRVNNQVIGQDFVCSKQGFRATKYVHRKDRVLPPPPATREGCLAMIRLALRDGGTWVVTKFVKEHTHKLMSPSKVPWRGSEKHLVSEDEKDKRIRELSLELHNERQKWKRRCAVYEEQLNMVLNDLEKHTEYISQKVADIVRSIREIEEEKSDSDGR* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2667 250 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
Lja3g2667 250 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 249 - -
Lja3g2667 250 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 249 - -
Lja3g2667 250 Coils Coil 180 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2667 Lja-Chr3 37610363 37623157 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lja3g2667 FAR1 6.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2667 - - gmx:100813124 419.853