Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2654 ATGGCTCATCTTCCACAGGAGAAAAAAGTGGTTGTGGCAGTGGTGGTGGCCGTGGCACTACAGGAGGCTGAGAACAACGAACTGGAAGGCGTGGTTGTGGCAGTGGTGGTGGCCGTGGCACTACAGGAGGCTGAGAACAAGGAACTGCAAGGCGTGGCTGTGACGGTGGTGGAGGATGGCGAATTTGATCAACATCTGATAGCCTTCGGCCGCCTTCATAATCAGCCCATCCTCTTCGTCTTAGATCACGCTGCGAGAGCAAACGCAAGAAGCAACATACCGCCCGTAGACAATACGACCCAAAAGATCACTATTAATGGTGTGTTGTTTTCTTGGAATTTTCAGATGGAGAGTGGTAGGAACTCACCCTGTGCTGCTTGCAAGATCCTCCGTAGAAGTTCCACTCAGAATTGTGTTCTTGCTCCCTATTTCACTGAACACGAGCCCCACAAATTTGCAAATGTGGACACCAATGCCATCAAGATGCTTCTGGAGCTGAACTTGGGGAGGAAAAGG 516 0.5078 MAHLPQEKKVVVAVVVAVALQEAENNELEGVVVAVVVAVALQEAENKELQGVAVTVVEDGEFDQHLIAFGRLHNQPILFVLDHAARANARSNIPPVDNTTQKITINGVLFSWNFQMESGRNSPCAACKILRRSSTQNCVLAPYFTEHEPHKFANVDTNAIKMLLELNLGRKR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2654 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 120 167 - -
Lja3g2654 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 120 167 - -
Lja3g2654 172 ProSiteProfiles LOB domain profile. 122 172 IPR004883 -
Lja3g2654 172 Pfam Lateral organ boundaries (LOB) domain 123 156 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2654 Lja-Chr3 36694924 36699029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2654 122 166 AS2 family AT2G40470 54.000 2.45e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lja3g2654 LOB 3.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2654 - - lja:Lj0g3v0327669.2 120.938