Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2629 ATGCTCTCACCATCTTTTACCACCGCCACCACTTTCTCCGGCCAAATTGCAACTTCGCCGATAGGCTACGTCAGATCCCGGCCAGTAATCGCATTCGCCACCGCCACCGAAGCAGACTACCGACCTACACCTTCTTTGTATCTGAGCACCCACGGCGACGGCGACATGGCTTCCTGCACTTCGCTTTACGAGATTCTCGGAATCGCCGCCGCCGCGTCAGACCAGGAGATCAAGGCGGCGTACCGGCGGCTTGCTAGAGTCCGTCACCCTGACGTGGCGGCGGTTGATCGGAAGGACTCGTCGACAAACGAGTTCATGAAGATCCACGCTGCATACTCGACGTTATCTGATCCCGAGAAGCGTGCCAGCTATGATAGGAGCATGAACCGGCGGAGGCGGTCGCTGACGGCAACGGTGACGCCGAGATTATCCGGAATAACAAAATCATGGCGGTGGCGGTGGGAGAAGCAGATCGGTTTTTTATGGAGGGGATTTCCAACATGA 504 0.5694 MLSPSFTTATTFSGQIATSPIGYVRSRPVIAFATATEADYRPTPSLYLSTHGDGDMASCTSLYEILGIAAAASDQEIKAAYRRLARVRHPDVAAVDRKDSSTNEFMKIHAAYSTLSDPEKRASYDRSMNRRRRSLTATVTPRLSGITKSWRWRWEKQIGFLWRGFPT* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2629 167 SMART dnaj_3 60 120 IPR001623 -
Lja3g2629 167 SUPERFAMILY Chaperone J-domain 56 131 IPR036869 -
Lja3g2629 167 ProSiteProfiles dnaJ domain profile. 61 128 IPR001623 -
Lja3g2629 167 Pfam DnaJ domain 62 125 IPR001623 -
Lja3g2629 167 CDD DnaJ 63 117 IPR001623 -
Lja3g2629 167 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Lja3g2629 167 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 8 155 - -
Lja3g2629 167 PANTHER - 8 155 - -
Lja3g2629 167 PRINTS DnaJ domain signature 81 96 IPR001623 -
Lja3g2629 167 PRINTS DnaJ domain signature 63 81 IPR001623 -
Lja3g2629 167 PRINTS DnaJ domain signature 100 120 IPR001623 -
Lja3g2629 167 Gene3D DnaJ domain 51 144 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2629 Lja-Chr3 36069723 36071262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2629 63 125 C2H2 Transcription Factor Family AT1G74250 46.970 4.87e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2629 - - gmx:100800959 152.14