Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2625 ATGGCTTCTTCAACATCCTTATTCGCTCTTCTCCTTTTGCTTTTCCATGTTCAACATTCATCATCATTCTCCCTCTCCGTTGAGAAACTGGAAGAGGACGTTATAGTCTCACCTAACCGCACATTCACTGCAGGGTTTTATCCTGCAGGGGAAAACGCATATTACTTTGCCATATGGTTCACCCAACCTCATGATCAAAACACCACCATCACGGTTGTTTGGATCGCGAACCGCGACCAACCAGTGAACGGAAAACGGTCCACACTCTCCCTTCTCAAGACAGGGAACCTCATCCTAACAGATGCAGGCCAGTCCATCGTTTGGTCCACAGACACCAACTCAAACTTCCCTCTTGAGATGCATTTGCAAGAAACAGGAAACCTCGTTCTCCGAAACCAGAACAACAAAAGCTCTGTTTTGTGGCAGAGCTTTGATTTCCCAACAGACACACTCCTTCCTGATCAGAGCCTCAAGAGGCACATGAAGCTTGTCTCGTCGGTAAGCAAAACCGACTACTCCTCCGGCTTCTACAAGCTCATCTTTGACGATGACAACGTTCTCCGTCTTCTCTACGACGGCCCTCGAATTTCAAGCCTTTATTGGTATGATCCTTGGCTTGTGAGCTGGCAAGCTGGTAGAACCACCTACAATAGTAGCAGGGTCGCGACGCTCAATCGTTTCGGGTACTTCAGTTCTTCTGATGCTTTCGCTATGAAAGCATCTGATTATGGATCAGATCAACTGATCCAACGAAGACTGACCCTTGACCACGATGGTAATGTTCGTGTCTATAGCCGCAAACATTACCATCGTGGTCAAGAGGGGTGGTCAGTGACCGGGCAGTTCCGTCAAGAACCATGTGTAATTCATGGGATTTGTGGACCCAATAGTATTTGTAGTATTGATCCAAGCAGTGGAAGAAAGTGTACGTGTGTTCCGGGGTATAGCAGGATCAACAATCGAGATTTGTCTCGAGGTTGCAAGCCAAATTTCCAACTTTCATGCAATAATAACCTGTCAGGGTCTCGTTCTCTCTTCCATTTGCTACCCCATGTTGAGTTTTATGGATACGACTTAGGATTCCAGAAAAACTACACCTACAAGCAATGTGAGGATTTGTGCTTGCAAGAGTGCAGCTGCCTAGCCTTCCAGTACAAAATATCGGACGGAGATACTGTGTTTTCGTGTTATACAAAGACGCAGTTGCTAAATGGGCGTAGCTCGCCAGATTTTCAAGGATCAGTCTTCTTGCGATTGCCCGAAATCGGAGAGTTCTCCCTCAAAGATAATGGCTTGGTTTGTTCGAGAAATGGAGAAGGAGAGCAAGTAGAGAGAGCATACTCGAAAGGAAAAGAAAATGGTTCTGTCAAGTTCATGCTTTGGTTTGCAACTGGCTTGGGAGGGGTTGAACTTGTGTGCATCTTTCTGGTGTGGTGTTTCTTGATTAGGAATAATACTAGTAAAGACAACCAAGGCTATGTTCTTGCAGCAGCAACAGGGTTTCAAAGATTCAGCTACTCTGAGCTGAAAAAAGCCACAAAAGGTTTCAGCCAAGAGATTGGAAGGGGTGGTGGAGGAACTGTGTATAAGGGTGTGTTATCAGATGATAGAGTTGCCGCCATAAAGGTACTGCATGCTGCTGCAGCAAACAACCAAGGAGAGAGTGAGTTTCATGCTGAAGTGAATTTTATTGGAAGGCTTAACCACATGAATTTAATTGGCATGTGGGGGTATTGTGCTGAGGGAAAGCACAGGATTTTGGTGTATGAGTACATGGAGAAAGGTTCTTTGGCTGAGAATCTCTCCTCATCAAATGCACTTGATTGGGGAAAGAGGTATAACATTGCTCTTGGAACAGCAAGAGGTCTTGCCTATCTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATAAAGCCCCAAAACATTCTTCTTGGCACTGATTACCAACCCAAAGTAGCAGATTTTGGCTTATCTAAACTACTTCAGAGGAACAATCTCAACAATTCAAGTTTCTCAAGGATAAGAGGGACAAGAGGTTACATGGCACCAGAATGGGTTTTTAACTTGCCCATAACTTCCAAGGTGGATGTTTATAGCTATGGAGTTGTTGTCTTGGAGATGATAACTGGAAGGAGTCCAATGACAGGTATCCAAAATGGAGCAGAAGAATTACTACATCATGAGAGATTGATACCATGGGTGAGGGAGATCAAGAGGAGGAATGTATCAGAAGCAGGGGTATCTTGGGTGGAAGGAATCATTGACCCTGCATTGGGAACAGATTATGACATGAATAAATTGGAGACTTTGGCAACAGTGGCTTTGGATTGTGTAGATGAAGAGAAAGATGTGAGACCAAGCATGAGTCAAGTTGCTCAGAGGCTCCAAAGTCATCAACATGATTCTTGA 2415 0.4464 MASSTSLFALLLLLFHVQHSSSFSLSVEKLEEDVIVSPNRTFTAGFYPAGENAYYFAIWFTQPHDQNTTITVVWIANRDQPVNGKRSTLSLLKTGNLILTDAGQSIVWSTDTNSNFPLEMHLQETGNLVLRNQNNKSSVLWQSFDFPTDTLLPDQSLKRHMKLVSSVSKTDYSSGFYKLIFDDDNVLRLLYDGPRISSLYWYDPWLVSWQAGRTTYNSSRVATLNRFGYFSSSDAFAMKASDYGSDQLIQRRLTLDHDGNVRVYSRKHYHRGQEGWSVTGQFRQEPCVIHGICGPNSICSIDPSSGRKCTCVPGYSRINNRDLSRGCKPNFQLSCNNNLSGSRSLFHLLPHVEFYGYDLGFQKNYTYKQCEDLCLQECSCLAFQYKISDGDTVFSCYTKTQLLNGRSSPDFQGSVFLRLPEIGEFSLKDNGLVCSRNGEGEQVERAYSKGKENGSVKFMLWFATGLGGVELVCIFLVWCFLIRNNTSKDNQGYVLAAATGFQRFSYSELKKATKGFSQEIGRGGGGTVYKGVLSDDRVAAIKVLHAAAANNQGESEFHAEVNFIGRLNHMNLIGMWGYCAEGKHRILVYEYMEKGSLAENLSSSNALDWGKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLGTDYQPKVADFGLSKLLQRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGVVVLEMITGRSPMTGIQNGAEELLHHERLIPWVREIKRRNVSEAGVSWVEGIIDPALGTDYDMNKLETLATVALDCVDEEKDVRPSMSQVAQRLQSHQHDS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2625 804 Pfam S-locus glycoprotein domain 246 317 IPR000858 GO:0048544
Lja3g2625 804 SUPERFAMILY Protein kinase-like (PK-like) 495 798 IPR011009 -
Lja3g2625 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 804 - -
Lja3g2625 804 CDD STKc_IRAK 520 798 - -
Lja3g2625 804 SMART serkin_6 514 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2625 804 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Lja3g2625 804 SMART blect_4 26 147 IPR001480 -
Lja3g2625 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Lja3g2625 804 ProSiteProfiles PAN/Apple domain profile. 335 420 IPR003609 -
Lja3g2625 804 Gene3D Phosphorylase Kinase; domain 1 480 591 - -
Lja3g2625 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Lja3g2625 804 Gene3D Transferase(Phosphotransferase) domain 1 592 804 - -
Lja3g2625 804 Pfam D-mannose binding lectin 71 161 IPR001480 -
Lja3g2625 804 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 4 804 - -
Lja3g2625 804 Pfam Protein kinase domain 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2625 804 CDD B_lectin 35 147 IPR001480 -
Lja3g2625 804 Gene3D - 28 145 IPR036426 -
Lja3g2625 804 CDD PAN_AP_plant 331 420 - -
Lja3g2625 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 165 IPR036426 -
Lja3g2625 804 Pfam PAN-like domain 361 401 IPR003609 -
Lja3g2625 804 ProSiteProfiles Protein kinase domain profile. 514 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2625 804 ProSiteProfiles Bulb-type lectin domain profile. 20 143 IPR001480 -
Lja3g2625 804 Gene3D - 146 273 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2625 Lja-Chr3 36014057 36016881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2625 504 799 Trihelix Transcription Factor Family AT5G38560 41.333 5.76e-65 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja3g2625 Pkinase 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2625 - - gmx:100806357 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2625 3 36014057 36016881 Lja3g2625 3 36014057 36016881 ECH