Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2617 ATGGAGGTGCCTACAATATTCTGGGTCGTCATGACGGCGATAGCTGCTGTGATTCCGATATGGGCTTGGCATATGCTGAACAAGCTGTGGCTGAGGCCCAAGAGGTTAGAAAAGCTTCTCATTGCTCAAGGTCTTCGAGGAGATCCATACAAGCTGCTTTCAGGTGACAACTCCAAGCAGATGTACATGCTCAAGATGCAACAAGAAGCCAAATCAAAATCCACCGGTCTCTCCAAAGATGATGCTGCACCACGCATCTTCTCTCCGATTCATGAAACAATCAACCAATATGGAAAGAATTCATTTTTTTGGGATGGCACAAAATTACACGTGGTCATCACGGATCCAGTGGAAATCAAAGAAGTGCTTAGCAAGATGAATGACTTCCCAAAACAAAAGCTAAATAATCCAATTGCTAAGTATTTTATGACCGGTCTAGCAAGTTATGAGGGTGAGAAATGGGCTAAACATCGAAAGATTATCAACCCAGCATTCCACTTAGAAAATATGAAAGGTATGCTGCCAGCATTTGTTGAAAGCTGTCATGATATGATTAGCAAATGGAAAGGAATCATGTTTAATTCATCATTAGATGGAACGTGTGAGATTGATGTTTGGCCTTCCCTTCAGGATTTGAGTCGTGATGCAATTTCTAAAACAGCATTTGGAAGCAGCTACGCAGAAGGAACAAAGATTTTTGAACTTCTGAAGAGGCTAGGGTATCTGATTTTAACTACACAACGTTATACCAATATTCCAATATGGTGGCTTCTACCAACAACCACCAATAAGACGATAAAGAAAATTAAAAGGGATATGCATAATTCACTTGAGGGTATCATTGAAAAACGAAAGAAGGCATGGAAGAATGGTGAAACCACCAAAGACGATTTACTAGGCACACTTTTGCAAGCAAGCAACATTGAAACCCAAGGTCAGGAAAACATGAAGAAGACTAATGGAATGACCACAAAAGAAGTAATTGAGGAATGCCGGCTTTTCTACCTAGCGGGGCAAGAGACCGTTGCCGATTTGCTAGTTTGGACAATGGTATTATTGGCTAAGTATCCTGAATGGCAAGAAAGAGCAAGAGAGGAAGTTTTGCAAGTTTTTGGGAACCAAATTCCAAACTTTGAAGGGTTAACTCGCCTTAAAGTTGTAACAATGGTATTAAATGAGGTTCTCAGGTTATACCCACCTGCAACTAACATCAATCGAGCTCTTGAAAAGGATATCAAACTTGGAAACATTTCCTTGCCCGCAGGAGTACATATTTCTATTCCATTACTTTTAGTTCACCATGATCATGACATTTGGGGTGATGATGCGAAGGAGTTCAATCCTGAGAGATTCTCTGAAGGAATTGCAAAGGCAACCAAAGGCAAGGTTTGTTATTTCCCATTTGGATGGGGTCCTAGAATATGCATTGGGCAAAACTTTGTGATTTTGGAAGCCAAGATAGTGTTCTCAATGCTTCTGCAAAATTTCTCATTTGAGCTTTCTCCCACTTATGCACATGTTCCTACCACTTTGCTTACTCTGCAGCCAAAACACGGGGCACCCATCATCTTGCATAGACTATATTGA 1587 0.4083 MEVPTIFWVVMTAIAAVIPIWAWHMLNKLWLRPKRLEKLLIAQGLRGDPYKLLSGDNSKQMYMLKMQQEAKSKSTGLSKDDAAPRIFSPIHETINQYGKNSFFWDGTKLHVVITDPVEIKEVLSKMNDFPKQKLNNPIAKYFMTGLASYEGEKWAKHRKIINPAFHLENMKGMLPAFVESCHDMISKWKGIMFNSSLDGTCEIDVWPSLQDLSRDAISKTAFGSSYAEGTKIFELLKRLGYLILTTQRYTNIPIWWLLPTTTNKTIKKIKRDMHNSLEGIIEKRKKAWKNGETTKDDLLGTLLQASNIETQGQENMKKTNGMTTKEVIEECRLFYLAGQETVADLLVWTMVLLAKYPEWQERAREEVLQVFGNQIPNFEGLTRLKVVTMVLNEVLRLYPPATNINRALEKDIKLGNISLPAGVHISIPLLLVHHDHDIWGDDAKEFNPERFSEGIAKATKGKVCYFPFGWGPRICIGQNFVILEAKIVFSMLLQNFSFELSPTYAHVPTTLLTLQPKHGAPIILHRLY* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2617 528 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 Pfam Cytochrome P450 90 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 Gene3D Cytochrome P450 79 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PANTHER CYTOCHROME 13 523 - -
Lja3g2617 528 SUPERFAMILY Cytochrome P450 86 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2617 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Lja3g2617 528 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2617 Lja-Chr3 35912779 35918819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2617 1 527 Cytochrome P450 AT3G14690 48.956 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2617 - K17873 ag:BAL45207 773.081