Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2608 ATGGAGCTGATAAGTTCCACACTCTACCTCATCTTCACCCTAGTCTTGATCTTTGTTCTTCGATCAGTGCTTGCAGCAAGAGGTAATACAAAGAGCAAACCAAATAAGTCTAAACTCCCTCCAGGACCAACCCCTCTTCCGATCATAGGAAACCTCCACAAACTGGGAAACAAGCCCCATCACTCCATGGCTAAGCTCTCAGAAATTCACGGCCCAATAATGACCTTAAAGTTTGGCCAAGTCACCGCCATAATCATATCCTCAGCTGACATGGCCAAAGAAGTGCTCCAAACCCACGACCTCTCACTCTCAAACCGACCTCTCCCTGACGCCTTAACAGTTCTCAACCACAACAAATTTAGCTTGTCCTTCATGCGGGTCTCACCCCGGTGGCGCGACCTCAGAAGAATATGCAACGACCAACTATTCGCCAAAACTACCCTCGATGCCAGCCAGGCCCTGAGGCGCAAGAAGCTGCAGGATCTCTTGACTGACATCAACAAGTGCAGTGAGATTGGTGAAGCTGTGGATATTGGAAGAGCAGCTTTCAAGACCACGGTTAATCTCCTTTCCAACACTTTTTTCTCCGTAGATTTTGTGCACTCTGCAGAGGAAGCTGGGGAGTACAAGGAGATAGTTGTCAGCATATTGAGGGAGGCCGGAGCGCCCAACTTGTCTGATTTTTACCCTGCGCTAAAGTTTCTTGACTTGCAAGGGATCAGAAGGAGGTCGATTGTGGAGGTCAAGAAGGTGTTGGCCATCTTCAGGCGCTTCGTTGGGGAACGAATGAATATGAGAGAAGGATCAGGTTCTGCTGGGAATGATGATGTGCTTGATGCCTTGCTTAACATCTCTAAGGAGAATGGCAAGATAGAGATGGATAAAGATGAGATTGAACATTTATTGATGAACATATTTGTTGCTGGAACCGACACAACAACATACACATTGGAATGGGCAATGGCAGAGTTAATTCACAATCCAACCATCATGTCAAAAGTCGAAAAGGAGCTTCAACAAGTAGTAGGAAAAGGCATTCCTGTAGAAGAAACAGATATCACAAGCCTCCCTTACTTGCATGCAGTTATAAAAGAAACCTTCCGTTTGCACCCACCAGTTCCCTTATTACTCCCACGAAAAGCAGAGGTAGATGTTGAAATCAGTGGCTACACCATCCCAAAAGATGCACAACTGTTCATTAACGCATGGGTTATTGGTAGGGACCCAACTAAGTGGGAAAATCCAACTGTGTTTTCACCTGAGAGGTTCTTGGACTCTGAAATTGATGTGAAAGGGCACCACTTTGAGCTCATTCCATTTGGGTCTGGACGAAGAATATGCCCTGGTTTGCCTCTGGCTATTAGAATGTTACCATTGATGTTGGGATCGTTGATCAATTGCTTTAATTGGAAGCTTGAAGATGGTATCAAACTAGATGATTTGGATAAGGAAGATGAGTATGGGATTACCATGGAAAAATCTCAACCCGTTCGTGTTGTTCCAATCAAATTAACTGAGCAATAG 1524 0.4514 MELISSTLYLIFTLVLIFVLRSVLAARGNTKSKPNKSKLPPGPTPLPIIGNLHKLGNKPHHSMAKLSEIHGPIMTLKFGQVTAIIISSADMAKEVLQTHDLSLSNRPLPDALTVLNHNKFSLSFMRVSPRWRDLRRICNDQLFAKTTLDASQALRRKKLQDLLTDINKCSEIGEAVDIGRAAFKTTVNLLSNTFFSVDFVHSAEEAGEYKEIVVSILREAGAPNLSDFYPALKFLDLQGIRRRSIVEVKKVLAIFRRFVGERMNMREGSGSAGNDDVLDALLNISKENGKIEMDKDEIEHLLMNIFVAGTDTTTYTLEWAMAELIHNPTIMSKVEKELQQVVGKGIPVEETDITSLPYLHAVIKETFRLHPPVPLLLPRKAEVDVEISGYTIPKDAQLFINAWVIGRDPTKWENPTVFSPERFLDSEIDVKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLINCFNWKLEDGIKLDDLDKEDEYGITMEKSQPVRVVPIKLTEQ* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2608 507 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 505 - -
Lja3g2608 507 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 505 - -
Lja3g2608 507 Pfam Cytochrome P450 40 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2608 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lja3g2608 507 Gene3D Cytochrome P450 25 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2608 Lja-Chr3 35693606 35695868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2608 1 503 Cytochrome P450 AT2G45550 44.794 1.07e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2608 - - gmx:100798291 596.275