Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2591 ATGGACACGACGAAAAACCCATCTGGGGATTCTTCGAATTTTGAATCTTTCATGCACAATTCTTCATCACGTAGAAGTGCCACTGCCATGTCAATTCAGTCCAGGAGTTCTGGCTGGAATTCTACCCGGGAAGTCACTTTTGCTCACTCAGGATCCAAGCCTGTGAGGTATGGGTCAAAGGGTGCTGATTCTGAAGCTTTGAGCATGTCCCAGAGGGAAATCAGTGATGAGGATGCTAGGTTGATTTACATTGATGATCCTGAGAGGACAAACCAGAGGTTTGAATTTGCAGGGAATTCGATTCGTACTGGAAAGTACTCTGTCTTCACCTTTCTGCCAAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATGTATATTTCCTTATCATTGCTATTCTTAATCAGCTTCCTCAGCTTGCTGTTTTTGGGAGGGGTGTTTCCATTTTGCCTTTGGCATTTGTCCTGCTTGTTACTGCTGTGAAGGATGCATATGAGGATTGGAGGAGGCACAGGTCAGACAAAGTTGAGAACAATAGGTTAGCATTGGTTTTGGTTGATGGGAATTTCCAAGAGAAGAAGTGGAAGGAAATTAGAGTTGGTGAGATCATTAAAATCAGTGCAAATGAAGCCATTCCTTGTGACTTTGTGTTGCTCTCAACTAGTGACCCTACTGGGGTTGCTTATGTGCAGACTCTTAATCTAGATGGAGAGTCTAATTTGAAGACTAGGTATGCAAAACAAGAGACTCAATCTAAGTTTCATGACAGAGAGAGGGTTAGTGGGTTGATCAAGTGTGAGAAACCCAATAGGAATATATATGGGTTTCAGGCTAATATGGACATTGAGGGAAAGAGGTTGTCTCTTGGGTCCTCCAATATCATCCTTAGAGGCTGTGAACTCAAGAATACTAAGTGGGCACTTGGTGTTGCTGTGTATTGTGGTCGTGAGACCAAAGCTATGCTCAACAACTCAGGAGCTCCATCTAAGAGGAGCCGCCTCGAGACTCGCATGAACTCTGAGATCATCATGCTGTCTGTCTTTCTTGTAGCTTTGTGCACAGTCACCTCAGTTTGTGCTGCTGTTTGGTTAAAACGACACAAGAATGAGTTAAATCTCTTGCCTTATTATAGGAAACTGTATTTTCCGGAGGGAAAGGAGGACAACTATGAATATTATGGATGGGGATTGGAGATCCTTTTCACATTCCTTATGTCAGTTATAGTGTACCAGATCATGATCCCCATATCCTTATACATTTCTATGGAGCTTGTCCGGGTTGGTCAGGCCTACTTCATGATCAAAGACTCTAGAATGTATGATGAGGCCACAAATTCAAGATTTCAGTGCAGGGCCTTGAATATTAATGAAGATTTAGGGCAAATCAAATATGTCTTTTCTGATAAAACTGGTACACTGACTGAGAACAAGATGGAGTTTCAATGCGCTAGCATCTACGGGGTTGATTACAGTACAGCAGAAGCCAGTCTTGAGTATGAGCAAGCTGTTCAAGTTGATGGAAAAGTCTTGAAGCCAAAGATGAAGGTGAAAGTTAATCAAGATCTTTTGCAATTATCAAAAAGCAGATTTGCAAATGTAGAGGGGAAACAAATCTACGATTTCTTTCTAGCATTGGCAGCTTGCAATACTATTGTGCCTATTATCACTGAGACATCTGATCCGGCAGTCAAGCTCATAGATTATCAAGGGGAATCACCAGATGAACAAGCATTGGCATATGCTGCCGCTGCCTATGGTTTCATGCTTATAGAACGAACCTCAGGTCACATAGTCGTTGATATTCATGGAGAAAGACATAGGTTCAATGTCTTGGGTTTGCATGAATTTGATAGTGACCGGAAAAGGATGTCAGTTATATTGGGGTACAGTGATAATTCTGTGAAACTTTTTGTTAAAGGGGCAGATACATCCATGCTTAGTGTGATAGATAAATCATCGAACAAGGGGATAATACAAGCAACTGAAACCCATCTTCACTCTTATTCTTCCCTGGGTTTGAGGACGCTTGTTATTGGGATGCGGGACTTGAATGCTTCAGATTTTGAGCAATGGCACTTTGCCTTTGAGGCAGCAAGTACTGCTTTGATTGGTAGAGCTGCTTTGCTTCGCAAGGTTGCTACCAATGTTGAGAACAATCTCTGCATATTGGGTGCAACTGCTATTGAAGACAAGTTGCAGCAAGGTGTGCCAGAATCTATCGAGTCTCTGAGGAGTGCAGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAGGAAACTGCCATATCAATCGGCTACTCCTCAAAGCTCCTAACTAACAGCATGACTCAAATTATAATTAAGAGCAACAATAGAGAGCATTGCAGAAGAAGTTTACATGACGCCCTTGTCATGTCCAGAAAAAACACTTCTGCATCCGGGGTCGCCAACTATCCTGAAGGAAGTTCTGATGCTATTACAATTCCGATAGCCTTAATTATTGATGGTACCAGCCTTGTATATATTCTTGACAATGAACTTGAGGAAGAGCTCTTTCAACTAGCAAGTAGATGTTCTGTTGTTCTGTGTTGTCGAGTGGCTCCATTGCAAAAGGCTGGGATTGTTGCCCTTGTGAAGAACAGGACAGCGGACATGACTCTAGCCATTGGTGATGGGGCAAATGATGTATCAATGATTCAAATGGCTGATGTTGGAGTCGGCATCAGTGGGCAGGAGGGTCGGCAAGCTGTAATGGCTTCGGATTTCGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGGCACTGGAATTACCAAAGACTGGGCTACATGATACTATATAATTTTTACAGAAATGCTATCTTTGTTCTTATCCTATTCTGGTATGTGCTCTTCACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAATCTACACTGCAATTCCAACTATTGTTGTTGGTATTCTGGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGTATCCTCAGCTTTATGGGGCTGGGCAGAGACAAGAGGCGTACAATAATAAATTATTTTTGTTCACGATGGCCGATACTTTATGGCAAAGCATTGTTGTCTTCTTTGTTCCTTTCATTGCATATTGGGGAAGCACTATAGATGTAGCAAGCATAGGTGACCTTTGGACTATTTCAGTAGTTATTTTGGTTAATTTGCACTTGGCCATGGATGTCATCAGGTGGAACTGGATCGCTCATGCAGCCATCTGGGGTTCTATCATTGCAACTTTCATATGTGTCATGGTTATTGATGTTATACCAGCATTATCCGGTTCCTGGGCCATCTTTCATGCTGCAAGCAATGGATTGTTCTGGTTATGTTTGCTCGGAATTGTGATAGCAGCATTGCTTCCTCGTTTTGTTGTAAAATTTATTCATCAATATTATTTTCCTAGTGATATTCAGATTTCAAGAGAAGCTGACAAGTTTGGGAATCAAAGGGTCAATAGAGGTGGCCAGATAGAAATGCATCCCACAAGATGA 3537 0.4179 MDTTKNPSGDSSNFESFMHNSSSRRSATAMSIQSRSSGWNSTREVTFAHSGSKPVRYGSKGADSEALSMSQREISDEDARLIYIDDPERTNQRFEFAGNSIRTGKYSVFTFLPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLALVLVDGNFQEKKWKEIRVGEIIKISANEAIPCDFVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQSKFHDRERVSGLIKCEKPNRNIYGFQANMDIEGKRLSLGSSNIILRGCELKNTKWALGVAVYCGRETKAMLNNSGAPSKRSRLETRMNSEIIMLSVFLVALCTVTSVCAAVWLKRHKNELNLLPYYRKLYFPEGKEDNYEYYGWGLEILFTFLMSVIVYQIMIPISLYISMELVRVGQAYFMIKDSRMYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIYGVDYSTAEASLEYEQAVQVDGKVLKPKMKVKVNQDLLQLSKSRFANVEGKQIYDFFLALAACNTIVPIITETSDPAVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVVDIHGERHRFNVLGLHEFDSDRKRMSVILGYSDNSVKLFVKGADTSMLSVIDKSSNKGIIQATETHLHSYSSLGLRTLVIGMRDLNASDFEQWHFAFEAASTALIGRAALLRKVATNVENNLCILGATAIEDKLQQGVPESIESLRSAGIKVWVLTGDKQETAISIGYSSKLLTNSMTQIIIKSNNREHCRRSLHDALVMSRKNTSASGVANYPEGSSDAITIPIALIIDGTSLVYILDNELEEELFQLASRCSVVLCCRVAPLQKAGIVALVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAIFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAIPTIVVGILDKDLSKRTLLKYPQLYGAGQRQEAYNNKLFLFTMADTLWQSIVVFFVPFIAYWGSTIDVASIGDLWTISVVILVNLHLAMDVIRWNWIAHAAIWGSIIATFICVMVIDVIPALSGSWAIFHAASNGLFWLCLLGIVIAALLPRFVVKFIHQYYFPSDIQISREADKFGNQRVNRGGQIEMHPTR* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2591 1178 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 1176 - -
Lja3g2591 1178 SUPERFAMILY HAD-like 453 923 IPR036412 -
Lja3g2591 1178 Gene3D - 566 697 IPR023299 GO:0000166
Lja3g2591 1178 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 1176 - -
Lja3g2591 1178 Pfam Phospholipid-translocating P-type ATPase C-terminal 910 1150 IPR032630 -
Lja3g2591 1178 MobiDBLite consensus disorder prediction 1 48 - -
Lja3g2591 1178 Pfam Cation transport ATPase (P-type) 571 647 - -
Lja3g2591 1178 ProSitePatterns E1-E2 ATPases phosphorylation site. 468 474 IPR018303 -
Lja3g2591 1178 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 472 735 IPR023299 GO:0000166
Lja3g2591 1178 Pfam E1-E2 ATPase 182 423 - -
Lja3g2591 1178 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 96 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lja3g2591 1178 Gene3D - 719 922 IPR023214 -
Lja3g2591 1178 SFLD p-type atpase 450 933 IPR044492 -
Lja3g2591 1178 MobiDBLite consensus disorder prediction 1 63 - -
Lja3g2591 1178 Pfam Phospholipid-translocating ATPase N-terminal 82 147 IPR032631 -
Lja3g2591 1178 CDD P-type_ATPase_APLT_Dnf-like 98 1042 - -
Lja3g2591 1178 Gene3D - 153 323 - -
Lja3g2591 1178 SUPERFAMILY Calcium ATPase, transduction domain A 179 320 IPR008250 -
Lja3g2591 1178 SUPERFAMILY Calcium ATPase, transmembrane domain M 88 1149 IPR023298 -
Lja3g2591 1178 SFLD Haloacid Dehalogenase 450 933 - -
Lja3g2591 1178 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Lja3g2591 1178 PRINTS P-type cation-transporting ATPase superfamily signature 466 480 - -
Lja3g2591 1178 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 398 487 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g2591 1178 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 968 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2591 Lja-Chr3 35132553 35138274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2591 36 1175 Primary Pumps ATPases AT5G04930 71.802 0.0 1727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2591 K14802 - gmx:100784988 1960.65