Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2590 ATGGAACTACCGTTCAAAATGTCACTTCGCTTCCCCACATTGGACTTCAAGTCATTGCCCTTTGGTAAGAACTTAGAGTCTGAACTGCTTGGTGGTGCAGTTGCTCTTGTTGCTGTGGGCCTTACTGCAGCTTTAATTTACTATCGCATGAAGAATCCCAAAGGTAGCTTGGACCCCCAAAATTTCAAAGAATTCAAACTTGTGAAGAAGACCCAGCTGAGCCCCAACGCTGCAAGATTCAGATTTGCCCTTCCCACTCCATCTTCTATATTGGGCCTTCCTGTTGGTAAACACATACGTGCCAGGGGAAGAGATAGCCAAGGAGAGGAAGTTATGAGATCATACACCCCAATCACGTTGGATTCAGATCGTGGCTACTTTGACTTGGTTGTCAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGACAAATGAAAGAAGGTGACAGCTTGGCCGTCAAGGGTCCAAAGGGGCGTTTTGGCTACAAACCTGGGCAAGTTAGAGCATTTGGAATGATTGCTGGTGGTTCAGGCATTACCCCAATGTTTCAGCTAATAAGAGCCATACTAGAAAATCCTAAGGACAAAACAAAGGTGTACCTCATTTACGCCAATGTGACTGTGGACGATATTCTTTTAAAGGAAGAACTAGACAACTTTGCGAACATATACCCTTACAGATTCCAACTCTACCATGTTCTTAACAAGCCTCCTACTGAATGGAATGGAGGGGTTGGGTTCATATCGAAGGAGATGATTGACTCCCATTGTCCAGCACCGTCCCCAGATATCCAGATACTTAGGTGCGGTCCACCACCCATGAACAAAGCCATTGCTAATCACCTTAACACACTTGGGTACACATCAACCATGCAGTTCGAGTTCTAA 891 0.4501 MELPFKMSLRFPTLDFKSLPFGKNLESELLGGAVALVAVGLTAALIYYRMKNPKGSLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDSQGEEVMRSYTPITLDSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYKPGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEELDNFANIYPYRFQLYHVLNKPPTEWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMNKAIANHLNTLGYTSTMQFEF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2590 296 Gene3D Translation factors 53 152 - -
Lja3g2590 296 CDD cyt_b5_reduct_like 65 296 - -
Lja3g2590 296 Pfam Oxidoreductase FAD-binding domain 65 163 IPR008333 -
Lja3g2590 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 210 221 IPR001709 GO:0016491
Lja3g2590 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 172 191 IPR001709 GO:0016491
Lja3g2590 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 266 274 IPR001709 GO:0016491
Lja3g2590 296 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 60 164 IPR017927 GO:0016491
Lja3g2590 296 SUPERFAMILY Riboflavin synthase domain-like 54 165 IPR017938 -
Lja3g2590 296 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 152 289 IPR039261 -
Lja3g2590 296 Gene3D - 153 296 IPR039261 -
Lja3g2590 296 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 296 - -
Lja3g2590 296 Pfam Oxidoreductase NAD-binding domain 173 279 IPR001433 GO:0016491
Lja3g2590 296 PRINTS Cytochrome B5 reductase signature 210 221 - -
Lja3g2590 296 PRINTS Cytochrome B5 reductase signature 149 163 - -
Lja3g2590 296 PRINTS Cytochrome B5 reductase signature 172 191 - -
Lja3g2590 296 PRINTS Cytochrome B5 reductase signature 91 102 - -
Lja3g2590 296 PRINTS Cytochrome B5 reductase signature 113 120 - -
Lja3g2590 296 PRINTS Cytochrome B5 reductase signature 266 274 - -
Lja3g2590 296 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 296 IPR001834 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2590 Lja-Chr3 35115094 35119638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2590 51 296 NADPH P450 reductases AT5G17770 69.106 1.31e-131 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2590 K00326 - gmx:100809584 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2590 3 35115094 35119638 Lja3g2590 3 35115094 35119638 ECH