Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2556 ATGGCGGAGGTCATCAACGCTCCCCCGGATTCACTCGACAAATCCCCACCACCATCCCCATCCTCCGCCTCAGCTCCCCCACCTCCTCCTCCTCCTCCTCCTCCGCCGTCGCTACCTCCTCCCTCCGATTCCGATCTCCCTCCACCACCTGCCCGCAGGAGGGACAGGCGGGACGACCGGGATTTCGATCGTCCACCTAACCGCCGCGATTACTACGACCGCAGCAACAACTCCCCCCCGCCCAAAGACCGGGACAGGGACTTCAAGCGCCGCCGCAGCCCCTCACCTCCTTCCCAACGCGACCGCGACCGCCGTCACTCCCCTCCTCCCCCCTACAAGCGTTCCAGGAGAGGTAGTCCCCGCGGTGGTTACCGTTACGGTCCCGATGACAGATTTGGATATGATAATTCTGGCGGTTATGAACGGGGAATGGGTGGAAGGGTTGGTTATGTCGATGACAAGTCTTATGGCCGGTTTGGACATCGTTCAGCTGGAGAATATCAAAATGGTATTTCTGATGTGGAATCCAATCGTGGTTATGCAGACTTGCCAAGTGGCAGTGCACAAAGAGAAGGGTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTGCCTGCTGAAGCAGAACGTAGGTATCAAGAATACAAGTCGGAGTACATTTCCACCCAAAAAAGAACCTATTTTAATTCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTGGCAAAGGACTTTTTGCTTGATTTGCAGAGTGGAACATTAGACCTAAATCCTGGTTTGAGTGCCTCTTCATCCAGCAAATCAGGCCAAGCTAGTGAACCGAATTCAGACGAGGAAGCAGACAATGCCGGTAAGCGGAAAAGACATGGTAGGGGATCTAATAAAGAAAATGATTTCTCAGCTGCTCCCAAGGCTCACTCTATTAGCTTGGAACCTAGACGAATACAGGCCGATATTCAACAGGCTCAGACCCTTGTCCGCAAGCTTGACATAGAAAAGGGGATTGCAGATAATATTTTATGCAACAGTGATCTCAATAAAAATGATGATAAGACTCACAGGGGATCTGTGGGTCCCATAATAATTTTAAGAGGTCTATCATCGGTTAAGGGTTTAGAGGGTGTTGAACTTTTGGACACACTTATTACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGTTTGATTGAGACTATTGAGGCTAAGGGTTTTAGGCATGTCAGGCCAGAGGGAACCACACATGAAGAAAAAGGTAAATCAGGGTCTGAATGGGAGAAGAAACTAGACTCATTTTGGCAGGGAAGGCTGAATGGTCAGGATCCCGTGGAAGTAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAGCGGAAGCGTTGGATCCATATATTAGGAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGCTGCACGAAGCTTTTTCATGCTTCTGAATTTGTGCACAAACACCTGAAGCTAAAACACCCAGAGCTTGCTGTTGAACAAACCACAAAAGTGCGTGAGGATCTCTATTTTCAAAATTACATGAATGATCCAGATGCTCCTGGTGGAAAGCCTGTAATGCAGCAAACTCAGAGGGACAAACCTTTAAAGCGAAGATTAGGTATTGAGGGCCGATTGAGAGATGATCGTGGTAGTCGTCAAAATCATGATCGGAGTGACCGATTGAATGATGGAGATAGACCTGAGAATTCTCCATCCCGCGAAAGGCAGTCTAAAGCACTTGAGATGGGAAACCATGATGAAACAATGTATGATACATATGCAGGACCTGGTGTTTCTCCATTTGCCTCAGATATGCCTCCTCCACCAGTATTGATGCCTGTACCTGGTGCTGAGTTGGTTGCCTCTTCCCATTATCCTTCTTGCTGCAATCTGATTGACTTCTTTTGA 2001 0.4753 MAEVINAPPDSLDKSPPPSPSSASAPPPPPPPPPPPSLPPPSDSDLPPPPARRRDRRDDRDFDRPPNRRDYYDRSNNSPPPKDRDRDFKRRRSPSPPSQRDRDRRHSPPPPYKRSRRGSPRGGYRYGPDDRFGYDNSGGYERGMGGRVGYVDDKSYGRFGHRSAGEYQNGISDVESNRGYADLPSGSAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRTYFNSHKDEEWLKDKYHPTNLLTVIERRNENARQLAKDFLLDLQSGTLDLNPGLSASSSSKSGQASEPNSDEEADNAGKRKRHGRGSNKENDFSAAPKAHSISLEPRRIQADIQQAQTLVRKLDIEKGIADNILCNSDLNKNDDKTHRGSVGPIIILRGLSSVKGLEGVELLDTLITYLWRIHGVDYYGLIETIEAKGFRHVRPEGTTHEEKGKSGSEWEKKLDSFWQGRLNGQDPVEVMTAKEKIDAAAAEALDPYIRKIRDEKYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELAVEQTTKVREDLYFQNYMNDPDAPGGKPVMQQTQRDKPLKRRLGIEGRLRDDRGSRQNHDRSDRLNDGDRPENSPSRERQSKALEMGNHDETMYDTYAGPGVSPFASDMPPPPVLMPVPGAELVASSHYPSCCNLIDFF* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2556 666 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 651 IPR039727 GO:0006397
Lja3g2556 666 MobiDBLite consensus disorder prediction 280 300 - -
Lja3g2556 666 MobiDBLite consensus disorder prediction 48 108 - -
Lja3g2556 666 Pfam Arsenite-resistance protein 2 437 629 IPR007042 -
Lja3g2556 666 Pfam SERRATE/Ars2, N-terminal domain 197 278 IPR021933 -
Lja3g2556 666 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 651 - -
Lja3g2556 666 ProSitePatterns Zinc finger C2H2 type domain signature. 501 524 IPR013087 -
Lja3g2556 666 MobiDBLite consensus disorder prediction 1 147 - -
Lja3g2556 666 MobiDBLite consensus disorder prediction 301 318 - -
Lja3g2556 666 SUPERFAMILY Formin homology 2 domain (FH2 domain) 26 243 - -
Lja3g2556 666 MobiDBLite consensus disorder prediction 280 336 - -
Lja3g2556 666 MobiDBLite consensus disorder prediction 11 47 - -
Lja3g2556 666 MobiDBLite consensus disorder prediction 561 616 - -
Lja3g2556 666 MobiDBLite consensus disorder prediction 544 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2556 Lja-Chr3 33151350 33160648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2556 79 648 C2H2 Transcription Factor Family AT2G27100 61.047 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2556 - - lja:Lj3g3v1739290.1 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2556 3 33151350 33160648 Lja3g2556 3 33151350 33160648 ECH