Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2554 ATGGGGATCCAAACTATGGGGTCTCAAGGTGGTGGAGACAGTAATGGAAAAAGGTCACAACTCCAGCCTTTGACGCGGCAAAACTCTATGTATGGTCTCACACTTGATGAGGTTCATAATCAATTAGGCGATTTAGGGAGACCGCTTAGTAGTCTGAACCTTGATGAACTTCTAAAAAGTGTGTGGACTGTTGAGACAAGTCAATCCTTGGAAATGGACAATGAGGGCACAGCACAAGCTAATCAAGCTGCTCCACAGCGTCAGGGTAGTCTGTCATTAAGTGGTGCACTCAGCAAGAAGACAGTACATGAGGTTTGGAGAGATATCCAACAAAACAAAGATAGCGAAAAGAAGCCACGAGACAGACAACCTACATTGGGAGAGATGACGTTGGAGGATTTCTTGGTGAAAGCAGGTGTTGTTGCAGACGCACCTTCAAATAAAAAGAATGATGGTACTACTGCTGGGATTGATCCGAATGTAGTAGTACCGCAGTTTCCTCCGCAGGGTCAGTGGATACCGTATCCACAACCACAATATCAGCATCCGCAACAAAGTTTAATGGGGATTTATGTGCCGAGCCAGGGTATAGCACAGTCATTACACATGGGTGGTTGCGCTTCATTGGATGTTTCTTATGCTGATAACCAGGTGGCACTGCCTCCACCTCTGATGGGAACAGTGTCGGATACGCAGACACCCGGAAGGAAAAGGAGCGCTCCTGAGGACATGGTGGAGAAGACTGTTGAGAGGAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAACTGGAGAATAAAGTCTCACGTCTTGAAGAGGAAAATGAAAGGCCGAGGAAAAGAAAGGAGCTTGAGCAGATGCTTCCATGTACACCACCTCCTGAACCTAAATATCAACTTCGCCGAATAGCATCAGCTCCACTCTGA 966 0.4679 MGIQTMGSQGGGDSNGKRSQLQPLTRQNSMYGLTLDEVHNQLGDLGRPLSSLNLDELLKSVWTVETSQSLEMDNEGTAQANQAAPQRQGSLSLSGALSKKTVHEVWRDIQQNKDSEKKPRDRQPTLGEMTLEDFLVKAGVVADAPSNKKNDGTTAGIDPNVVVPQFPPQGQWIPYPQPQYQHPQQSLMGIYVPSQGIAQSLHMGGCASLDVSYADNQVALPPPLMGTVSDTQTPGRKRSAPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERPRKRKELEQMLPCTPPPEPKYQLRRIASAPL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2554 321 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 20 319 - -
Lja3g2554 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 319 IPR043452 GO:0003700|GO:0045893
Lja3g2554 321 MobiDBLite consensus disorder prediction 258 299 - -
Lja3g2554 321 MobiDBLite consensus disorder prediction 73 92 - -
Lja3g2554 321 Pfam bZIP transcription factor 251 294 IPR004827 GO:0003700|GO:0006355
Lja3g2554 321 Gene3D - 249 302 - -
Lja3g2554 321 MobiDBLite consensus disorder prediction 258 321 - -
Lja3g2554 321 MobiDBLite consensus disorder prediction 1 28 - -
Lja3g2554 321 SMART brlzneu 247 303 IPR004827 GO:0003700|GO:0006355
Lja3g2554 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700|GO:0006355
Lja3g2554 321 Coils Coil 267 294 - -
Lja3g2554 321 SUPERFAMILY Leucine zipper domain 251 296 IPR046347 GO:0003700|GO:0006355
Lja3g2554 321 CDD bZIP_plant_BZIP46 251 305 - -
Lja3g2554 321 MobiDBLite consensus disorder prediction 223 246 - -
Lja3g2554 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2554 Lja-Chr3 33135358 33140991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2554 22 321 bZIP Transcription Factor Family AT3G56850 54.072 5.02e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g2554 bZIP_1 1.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2554 K14432 - gmx:100101875 465.692