Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2543 ATGGTTCACCACCTGCTTTCTTCTTTTTTCTCCATATTCTTAAAGAGAGCTTGCTCGGAGTTGGGAAGTGGTGGCCATGGCTTTCAGGCAGGAGGAGGCACATTCTTCGCCACTCACTTTTCTGATAAGAGTGCTCATGTTTTGAAGCTTAATGCATGTTCGTTCTTTGTTTATGTAGAAGAAAACGCTTTATATAGACTCCCAAGGACCATGATGGCATTGGAAGGGTCTGCTACTTGGGGTCTTATTACAATGCAATACTTGTGGTCTTTTTGGCAGGCTTTCATTAATATCAGCTCTGTTATTGCAACAGAGCTTTCTCTAGATGTGGCTGGAACTAATGATGGCTTGGAGAATTTTGCAAATTGCTACAATGTGGCAGAACTTATAGAAACTGATCTTATTTTAACTAGTAGCACTCCCACAGAAGACAAGCTTCAAGATGGAGTACGGGCTTGCATAGATATTCTACAAAGAGCTGGCATCAAGATGGATATCCTTTAA 504 0.4127 MVHHLLSSFFSIFLKRACSELGSGGHGFQAGGGTFFATHFSDKSAHVLKLNACSFFVYVEENALYRLPRTMMALEGSATWGLITMQYLWSFWQAFINISSVIATELSLDVAGTNDGLENFANCYNVAELIETDLILTSSTPTEDKLQDGVRACIDILQRAGIKMDIL* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2543 167 Gene3D - 120 167 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2543 Lja-Chr3 32758822 32763458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2543 126 167 Primary Pumps ATPases AT1G59820 66.667 2.43e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2543 K14802 K01530 var:108321397 58.5362