Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2534 ATGGAGTGGCTTCTGCAATTCCTTCATCTCCTCTTTGCAGCTTCTCTTCTTATCAGCAGTTCAGCAATCTCAGATCAAATTCCTAAGCATTATGTTGTTTATATGGGAAATTCATCACCAAACAACATTGCAGTAGATAGCCAAGTACCAGAATCTGCTCATCTGGAGCTACTATCATCAATTATTCCAAGAAGAGAGAGTGAGAGGATAGCTCTAATCCACCATTTCAGCCATGCCTTTAGTGGGTTCTCTGCCATGCTTACAGAGAGTGAAGCTTCTGCATTGTCTGGGCACGATGGTGTGGTGTCGGTGTTCCCAGATCCAATTCTTCAATTGCATACAACGCGATCTTGGGATTTCTTGGAATCAGATTTGGGAATGAAGCCTAGTAGTGGTGGCACTCCTCTTACACACCAACACTTATCAACTGATGATATCATTATTGGAGTGATAGACACCGGTATATGGCCAGAGTCTCCAAGTTTCAGAGATGAGGGTATAGGGAAGATTCCCTCCAGATGGAAAGGAGTTTGCATGGAGGGTCATGATTTCAAGAAATCCAATTGCAATAGAAAATTGATAGGTGCAAGATACTACACACAAGACACACCAGGTACCAACAAGACTTACATTGAAGGAGCCAAAGGTTCCCCAAGAGATTCCGTTGGACATGGGACTCACACTGCATCAACAGCATCTGGTATCTATGTAAAAAATGCTAGCTATTATGGTTTAGCAAAAGGAACAGCAAGAGGTGGTTCACCTTCTGCTAGAATAGCAGCATACAAAGCATGCTCAGAAGAAGGTTGTTCTGGTGCTACCGTACTCAAGGCTATTGATGATGCTGTTAGGGATGGAGTAGACATTATCTCTATCTCTATTGGACTTAGCTCACTAATGCAACCTGATTTTTTGGATGATCCCATTGCAATTGGAGCATTTCATGCTGAACAAATGGGGGTAATGGTGGTGTGCTCAGCTGGGAATGATGGTCCTGATCCTTATACAGTTGTGAACACGGCCCCGTGGATATTTACGGTTGCGGCTTCTAATATTGATAGGAACTTTCAGGCAACTGTTGTCCTTGGAAATGGGAAAAAATTTCAGGGAACAGGCATTAGCTTCTCAAACCTTACTAGTTCAAAGCTGTATCCTCTTGTCTTTGGAGAGAAAGTTGCTGCCAAATTTGCCCCAGCTTCAGAAGCTAGGAACTGTTATCCTGGATCACTAGATTACAACAAAGTAGCAGGCAACATTGTTGTTTGTGTTAGTGATGATCCAAGTATTTCAAGACGAGTCAAGAAGCTAGTTTTACAAGATGCTAAAGCCATGGGAATGATACTCATTGACGAGGACAGAAAATATGTTCCCTTTGATGCTGGTGCATTTCCCTTCACAGAGGTGGGGAATCTAGATGGGTATCAAATCCTTAAGTACATAAACGCCACCAAAAACCCAACTGCAACAGTTCTTCCAACAGTAGAAGTTCCTAGATATAAGCCTTCACCAATTGTTGCATCTTTCTCATCAAGAGGCCCTTCAAGCCTTACAGAAAACATTCTCAAGCCAGATGTCATGGCTCCAGGTGTTAGCATTTTAGCTGCCATGATTCCCATAAGTGATGAACCAGGAAGTGTTCCAATTGGGGAAAAGCCATCCTTGTTTGGCATAAGATCTGGTACATCCATGGCTTGTCCACATGTGACAGGAGCTGCAGCATTCATCAAATCAGTACATGGAAGATGGAGTCCTTCAATGATCAAATCAGCATTAATGACAACAGCTACAACCTACAACAACATGAGGAAGCCTGTGACAAACAGCTCAAACTACTTTGCCAACCCACATGAAATGGGAGTTGGGGAAATTAACCCACTAAGAGCTCTCTACCCTGGTTTGGTCTTTGAAACAGGTGTGGAAGACTACATCAGATTCCTTTGTTACTATGGTTATTCACAGAAGAACATAAGGTCAATGTCTAAGACAAATGTCACTTGTCCAAAGAAGTCCTCTGAAGATCTTATCTCCAACATCAATTACCCATCAATCTCTATAAAAACAATTAAAAGGCAACCGAAAGCAAAAGTGATCACAAGAACAGTTACCAATGTCGGACCCCTTAATGCCACATATGCTGCGAAGGTGCATGCACCTGAGGGATTGGTTGTTAAGGTTATCCCCAATAAACTTGTGTTTTCTGAGGGTGTTCAAAAATTGACCTACAAAGTCTCATTCTATGGCAAGGACGCCAATGCTGGATACCATTTTGGGTCTCTAACATGGCTTGATGGTAGACATTATGTTCATACAGTATTTGCAGTCCAAGTTGAATAA 2334 0.4229 MEWLLQFLHLLFAASLLISSSAISDQIPKHYVVYMGNSSPNNIAVDSQVPESAHLELLSSIIPRRESERIALIHHFSHAFSGFSAMLTESEASALSGHDGVVSVFPDPILQLHTTRSWDFLESDLGMKPSSGGTPLTHQHLSTDDIIIGVIDTGIWPESPSFRDEGIGKIPSRWKGVCMEGHDFKKSNCNRKLIGARYYTQDTPGTNKTYIEGAKGSPRDSVGHGTHTASTASGIYVKNASYYGLAKGTARGGSPSARIAAYKACSEEGCSGATVLKAIDDAVRDGVDIISISIGLSSLMQPDFLDDPIAIGAFHAEQMGVMVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNFQATVVLGNGKKFQGTGISFSNLTSSKLYPLVFGEKVAAKFAPASEARNCYPGSLDYNKVAGNIVVCVSDDPSISRRVKKLVLQDAKAMGMILIDEDRKYVPFDAGAFPFTEVGNLDGYQILKYINATKNPTATVLPTVEVPRYKPSPIVASFSSRGPSSLTENILKPDVMAPGVSILAAMIPISDEPGSVPIGEKPSLFGIRSGTSMACPHVTGAAAFIKSVHGRWSPSMIKSALMTTATTYNNMRKPVTNSSNYFANPHEMGVGEINPLRALYPGLVFETGVEDYIRFLCYYGYSQKNIRSMSKTNVTCPKKSSEDLISNINYPSISIKTIKRQPKAKVITRTVTNVGPLNATYAAKVHAPEGLVVKVIPNKLVFSEGVQKLTYKVSFYGKDANAGYHFGSLTWLDGRHYVHTVFAVQVE* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2534 777 Gene3D Peptidase S8/S53 domain 145 642 IPR036852 GO:0004252|GO:0006508
Lja3g2534 777 Pfam Peptidase inhibitor I9 30 113 IPR010259 -
Lja3g2534 777 SUPERFAMILY Subtilisin-like 113 633 IPR036852 GO:0004252|GO:0006508
Lja3g2534 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Lja3g2534 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Lja3g2534 777 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Lja3g2534 777 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Lja3g2534 777 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Lja3g2534 777 Pfam Subtilase family 144 600 IPR000209 GO:0006508|GO:0008236
Lja3g2534 777 CDD Peptidases_S8_3 110 596 IPR034197 -
Lja3g2534 777 Pfam Fibronectin type-III domain 677 774 IPR041469 -
Lja3g2534 777 ProSiteProfiles Serine proteases, subtilase domain profile. 117 629 - -
Lja3g2534 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 774 IPR045051 -
Lja3g2534 777 CDD PA_subtilisin_like 359 490 - -
Lja3g2534 777 Gene3D - 646 776 - -
Lja3g2534 777 Gene3D - 353 497 - -
Lja3g2534 777 PANTHER CUCUMISIN-LIKE 51 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2534 Lja-Chr3 32621818 32629423 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2534 31 774 Subtilisin-like Serine Gene Family AT1G20150 42.820 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2534 K25898 - gmx:100781053 1254.58