Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2531 ATGAATAACAAACCATGTTTCTTCTGGCTTTCTCTTCTCATCTTCTGCTTCTTCCTTCACTTCCACGCCTCCCTTGCTGCTTTGACCACCATCTCAGCAAATCAATCTCTTTCTGGTGATCAAACCCTTGTCTCCAAAGATGGGAACTTTGAACTGGGTTTCTTCAATCCAGGTAACTCCTCTAGATATTACATATCCATGTGGTACAAAAAGGTATCAACAAGAACATATGTTTGGGTAGCCAATAGAGATGACTCTGTTTCTGATAAGAACTCTTCCATTTTAACAATATATCATGGTAATTTAGTGCTCTTAGAGAATGGGAATCTAGTTTGGTCAACGAATTTGAGCTCTCCTAGTCCTAGCTCAGGTTCTGTAGAAGCTGTGCTTCTAGATAATGGGAATCTGATATTACGCGACAAGCCTAATGCATCAGAATTAGAATCTCTATGGCAGAGTTTTGATCATCCAACAGATACATGGCTTCCCGGTGGCAGAATAAAACGGGACAACAAAACAAAGAAGCCTCAGTATCTGACTTCATGGAAGAACTCTGAAGATCCAGCAACAGGCCTATTCTCTTTGCAATTGGACCCCAATGGAACCACTTCATATATGATTCTATGGAACAAAACTGAACTGTATTGGACAAGTGGTGCTTGGAATGGACATATTTTCAGCTTGGTTCCTGAGATGAGGCTTAACTACATTTACAATTTGAGCTTTGTGTCGAATGAGAACGAGAGCTACTTCACCTACACCTTGTACAACAATTCCCAACTATCTCGTTTCGTGATGGATGTCACGGGGCAGATCAAGCAATTGACATGGCTGGAAGATTCTCAGGAATGGAACTTGTACTGGTCACAGCCAAGCCGCCAATGTGAGGTTTATGCTGTTTGTGGTGCATTTGGGAGCTGCTCTGAAAGCTCCATGCCATATTGTAATTGTGTAAATGGCTATGAGCCAAAGTCACAATCTAATTGGGATATGGGAGATTACTCAGATGGGTGTGTGAAATCAACAAAGTTTCAATGTGAGTCATCCAATTCCTCTAATGGTACCAATGACAGGTTTTTAACAATGCCCAACATGGCTTTGCCTGAACATGCAGAGCTTCTGGGAGCAGATAATGTTGGGGAATGTGAGTTAACTTGCTTTAGCAACTGTTCTTGCAAAGCTTATGCTTTTTACAGTACCGATACCGTGTGTTCATTATGGTATGGAGATTTTTTGAATTTGCGACAGCTTAATAAGGATGATAGTTCAGGGCAGACTCTGTTTCTCAAACTTGCAGCATCAGAGTTTCATGATGATGATCCTAAGAGCAGCAATGGGATAAGCATTGGTGTTATTGCTGGTGCTGTTGGTGGTGGTGTTGTGGTGATTCTCCTAGCTCTTGTTGTAATTGTGGTGCTGAGGCGAAAAAAGAGACCAGGGGCTGCAAGTAATATTTTCAGCAAGCATTACAAAAAGAACCTGAGGAAGGAAGTTGTTGACTTGCCAACATTTGATTTCTCAGTCTTAGCATATGCCACCAAAAACTTTTCAATCTATAACAAACTTGGAGAAGGTGGCTTTGGACCAGTATACAAGGGAATGTTGATAGATGGACAAGAGATAGCTGTGAAAAGGCTTTCAAAAAGATCTACACAAGGGTTGGAAGAATTTAAAAATGAAGTGGCACTGATTGCCAAACTTCAGCACCGTAATCTCATAAAGCTTCTTGGTTGTTGTATTCAAGGAGAAGAAACAATGCTGGTTTATGAATACATGCCCAACAAAAGCTTGGACTACTTTGTTTTTGATGAAGCAAAAAAGATGTCATTGGATTGGGTTAAGCGTTTCAATATTATTAGTAGCATTGTTCGAGGACTTCTTTATCTTCATCAAGACTCAAGACTAAGGATTATTCACAGGGATCTCAAAACTAGCAATATACTACTAGACCTGAATTTGGAACCGAAAATATCAGACTTTGGCTTGGCTCGAATATTTTTGGGAGACCAAATTGAGGCAAACACAAATAGAGTGGCTGGAACATATGGCTACATGTCTCCAGAACATGTTGTCCATGGGCATTTCTCAATGAAATCAGATGTCTTTAGTTATGGCGTGATTGTACTAGAGATTGTAAGTGGGAAAAAGAACAGGGGATTTTCAGACCCAAAACACTACAATAATCTTCTTGGATATGCATGGAGATTATGGACTGAAGAGAGAGCACTGGAACTATTGGATGAAGTGTTACGGGAACAATACACACCATTTGAAGTCATACGAAGCATACAAGTCGGCCTATTGTGTGTGCAACAAAGGCCTGAAGATAGACCAGACATGTCATATGTGGTTCTAATGCTAAATGGTGAGAAACTTTTGCCAAAGCCAAAGGTTCCTGGATTTTATACCGAAAAAGATTTAAGTACCGAATCAGACTCTTCTTCATTGGCAAATCACAAATTATGCTCAACTATTGAAGTGTCCATCACAGAGTTAGATGCAAGATAG 2508 0.4027 MNNKPCFFWLSLLIFCFFLHFHASLAALTTISANQSLSGDQTLVSKDGNFELGFFNPGNSSRYYISMWYKKVSTRTYVWVANRDDSVSDKNSSILTIYHGNLVLLENGNLVWSTNLSSPSPSSGSVEAVLLDNGNLILRDKPNASELESLWQSFDHPTDTWLPGGRIKRDNKTKKPQYLTSWKNSEDPATGLFSLQLDPNGTTSYMILWNKTELYWTSGAWNGHIFSLVPEMRLNYIYNLSFVSNENESYFTYTLYNNSQLSRFVMDVTGQIKQLTWLEDSQEWNLYWSQPSRQCEVYAVCGAFGSCSESSMPYCNCVNGYEPKSQSNWDMGDYSDGCVKSTKFQCESSNSSNGTNDRFLTMPNMALPEHAELLGADNVGECELTCFSNCSCKAYAFYSTDTVCSLWYGDFLNLRQLNKDDSSGQTLFLKLAASEFHDDDPKSSNGISIGVIAGAVGGGVVVILLALVVIVVLRRKKRPGAASNIFSKHYKKNLRKEVVDLPTFDFSVLAYATKNFSIYNKLGEGGFGPVYKGMLIDGQEIAVKRLSKRSTQGLEEFKNEVALIAKLQHRNLIKLLGCCIQGEETMLVYEYMPNKSLDYFVFDEAKKMSLDWVKRFNIISSIVRGLLYLHQDSRLRIIHRDLKTSNILLDLNLEPKISDFGLARIFLGDQIEANTNRVAGTYGYMSPEHVVHGHFSMKSDVFSYGVIVLEIVSGKKNRGFSDPKHYNNLLGYAWRLWTEERALELLDEVLREQYTPFEVIRSIQVGLLCVQQRPEDRPDMSYVVLMLNGEKLLPKPKVPGFYTEKDLSTESDSSSLANHKLCSTIEVSITELDAR* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2531 835 Pfam Protein tyrosine and serine/threonine kinase 518 785 IPR001245 GO:0004672|GO:0006468
Lja3g2531 835 SUPERFAMILY Hairpin loop containing domain-like 356 414 - -
Lja3g2531 835 Gene3D Transferase(Phosphotransferase) domain 1 592 794 - -
Lja3g2531 835 Pfam D-mannose binding lectin 76 183 IPR001480 -
Lja3g2531 835 Gene3D Phosphorylase Kinase; domain 1 489 591 - -
Lja3g2531 835 Pfam PAN-like domain 354 413 IPR003609 -
Lja3g2531 835 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 830 - -
Lja3g2531 835 SUPERFAMILY Protein kinase-like (PK-like) 500 787 IPR011009 -
Lja3g2531 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Lja3g2531 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 222 IPR036426 -
Lja3g2531 835 PIRSF SRK 2 835 IPR024171 GO:0004674
Lja3g2531 835 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 830 - -
Lja3g2531 835 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Lja3g2531 835 ProSiteProfiles PAN/Apple domain profile. 346 432 IPR003609 -
Lja3g2531 835 SMART serkin_6 516 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2531 835 CDD B_lectin 34 157 IPR001480 -
Lja3g2531 835 CDD PAN_AP_plant 351 432 - -
Lja3g2531 835 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Lja3g2531 835 ProSiteProfiles Protein kinase domain profile. 516 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2531 835 SMART ntp_6 354 431 IPR003609 -
Lja3g2531 835 SMART blect_4 34 157 IPR001480 -
Lja3g2531 835 Gene3D - 24 154 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2531 Lja-Chr3 32579676 32582967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2531 439 802 Receptor kinase-like Gene Family AT4G23190 51.467 8.45e-127 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g2531 PK_Tyr_Ser-Thr 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2531 - - lja:Lj0g3v0348039.1 1293.87