Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2525 ATGATTTCTTCTTCATGTTTCCTTTGTTTACACTGTCAGGGAACAGGCATTAGCTTCTCAAACCTTACTAGTTCAAAGTTGTATCCTCTTGTCTTTGGAGAGAAAGTTGCTGCCAAATTCGCCCCAGCTTCTCAAGCTAGGAACTGTTATCCTGGATCACTAGATTACAACAAAGTAGCATGCAGCATTGTTGTTTGTGTTAGTGATGATCCAAGTATTTCAAGACGAGTCAAGAAGCTAGTTTTACAGGATGCTAAAGCCATGGGAATGATACTCATTGACGAGGACAGAAAATATGTTCCCTTTGATGCTGGTACATTACCCTTCACAGAGGTGGGGAATCTAGATGGGTATCAAATCCTTAAGTACATAAACGACACCAAAAACCCAACTGCAACAGTTCTTCCAACAGTAGAAGTTCCTAGATATAAGCCTTCACCAGTTGTTGCATCTTTCTCATCAAGAGGCCCTTCAAGCCTTACAGAAAACATTCTCAAGCCAGATGTCATGGCTCCAGGTGTTAGCATCTTCGCTGCCATGATTCCCAAAAGTGATGAACCAGGAAGTGTTCCAATTGGGGAAAAGTCATCCTTGTTTGGCATAAGATCTGGTACATCCATGGCTTGTCCACATGTGACAGGAGCTGCAGCATTCATCAAATCAGTACATGGAAGATGGAGTCCTTCAACGATCAAATCAGCATTAATGACAACAGGTTCAAGACCCACATCGAATTTGGATTTTCTGCAGTCAGGGAAATATGACATTCACGCAGTCAAGGAATGA 786 0.4211 MISSSCFLCLHCQGTGISFSNLTSSKLYPLVFGEKVAAKFAPASQARNCYPGSLDYNKVACSIVVCVSDDPSISRRVKKLVLQDAKAMGMILIDEDRKYVPFDAGTLPFTEVGNLDGYQILKYINDTKNPTATVLPTVEVPRYKPSPVVASFSSRGPSSLTENILKPDVMAPGVSIFAAMIPKSDEPGSVPIGEKSSLFGIRSGTSMACPHVTGAAAFIKSVHGRWSPSTIKSALMTTGSRPTSNLDFLQSGKYDIHAVKE* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2525 261 ProSitePatterns Serine proteases, subtilase family, serine active site. 204 214 IPR023828 -
Lja3g2525 261 Gene3D Peptidase S8/S53 domain 142 242 IPR036852 GO:0004252|GO:0006508
Lja3g2525 261 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 243 IPR045051 -
Lja3g2525 261 ProSiteProfiles Serine proteases, subtilase domain profile. 1 261 - -
Lja3g2525 261 Pfam Subtilase family 139 239 IPR000209 GO:0006508|GO:0008236
Lja3g2525 261 SUPERFAMILY Subtilisin-like 140 244 IPR036852 GO:0004252|GO:0006508
Lja3g2525 261 CDD PA_subtilisin_like 15 134 - -
Lja3g2525 261 Gene3D - 16 141 - -
Lja3g2525 261 PANTHER XYLEM SERINE PROTEINASE 1 15 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2525 Lja-Chr3 32494755 32496016 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2525 13 244 Subtilisin-like Serine Gene Family AT1G20150 39.655 1.38e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2525 K25898 - gmx:100809885 363.999