Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2522 ATGGCGGAGGTCATCAACGCTCCCCCGGATTCACTCGACAAATCCCCACCACCATCCCCATCCTCCGCCTCAGCTCCCCCACCTCCTCCTCCTCCTCCGCCGTCGCTACCTCCTCCCTCCGATTCCGATCTCCCTCCACCACCTGCCCGCAGGAGGGACAGGCGGGACGACCGGGATTTCGATCGTCCACCTAACCGCCGCGATTACTACGACCGCAGCAACAACTCCCCCCCGCCCAAAGACCGGGACAGGGACTTCAAGCGCCGCCGCAGCCCCTCACCTCCTTCCCAACGCGACCGCGACCGCCGTCACTCCCCTCCTCCCCCCTACAAGCGTTCCAGGAGAGGTAGTCCCCGCGGTGGTTACCGTTACGGTCCCGATGACAGCGGATTTGGATATGATAATTCTGGCGGTTATGAACGGGGAGTGGGTGGAAGGGTTGGTTATGTCGATGACAAGTCTTCTGGCCGATTTGGACATCGTTCTGCTGGGGGACATCAAAATGGGATTTCTGGTATGGCAGCTGTATAG 531 0.6121 MAEVINAPPDSLDKSPPPSPSSASAPPPPPPPPPSLPPPSDSDLPPPPARRRDRRDDRDFDRPPNRRDYYDRSNNSPPPKDRDRDFKRRRSPSPPSQRDRDRRHSPPPPYKRSRRGSPRGGYRYGPDDSGFGYDNSGGYERGVGGRVGYVDDKSSGRFGHRSAGGHQNGISGMAAV* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2522 176 MobiDBLite consensus disorder prediction 1 176 - -
Lja3g2522 176 MobiDBLite consensus disorder prediction 11 45 - -
Lja3g2522 176 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 174 - -
Lja3g2522 176 MobiDBLite consensus disorder prediction 46 106 - -
Lja3g2522 176 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 174 IPR039727 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2522 Lja-Chr3 32325692 32327832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2522 77 158 C2H2 Transcription Factor Family AT2G27100 50.000 3.24e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2522 - - lja:Lj3g3v1866030.1 136.346