Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2521 ATGGCGGAGGTCATCAACGCTCCCCCGGATTCACTCGACAAATCCCCACCACCATCCCCATCCTCCGCCTCAGCTCCCCCACCTCCTCCTCCTCCTCCGCCGTCGCTACCTCCTCCCTCCGATTCCGATCTCCCTCCACCACCTGCCCGCAGGAGGGACAGGCGGGACGACCGGGATTTCGATCGTCCACCTAACCGCCGCGATTACTACGACCGCAGCAACAACTCCCCCCCGCCCAAAGACCGGGACAGGGACTTCAAGCGCCGCCGCAGCCCCTCACCTCCTTCCCAACGCGACCGCGACCGCCGTCACTCCCCTCCTCCCCCCTACAAGCGTTCCAGGAGAGGTAGTCCCCGCGGTGGTTACCGTTACGGTCCCGATGACAGCGGATTTGGATATGATAATTCTGGCGGTTATGAACGGGGAGTGGGTGGAAGGGTTGGTTATGTCGATGACAAGTCTTCTGGCCGATTTGGACATCGTTCTGCTGGGGGACATCAAAATGGGATTTCTGATGTGGAATCCAATCGTGGTTATGCAGACTTGCCAAGTGGCAGTGCACAAAGAGAAGGGTTGATGTCCTATAAGCAATTCATTCAGCAGCTTGAGGATGATATACTGCCTGCTGAAGCAGAACGTAGGTATCAAGAATACAAGACGGAGTACATTTCCACCCAAAAAAGAACCTATTTTAATTCTCATAAGGATGAAGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGTACGTTTATAAACTAGGTGTCCACTAG 792 0.5379 MAEVINAPPDSLDKSPPPSPSSASAPPPPPPPPPSLPPPSDSDLPPPPARRRDRRDDRDFDRPPNRRDYYDRSNNSPPPKDRDRDFKRRRSPSPPSQRDRDRRHSPPPPYKRSRRGSPRGGYRYGPDDSGFGYDNSGGYERGVGGRVGYVDDKSSGRFGHRSAGGHQNGISDVESNRGYADLPSGSAQREGLMSYKQFIQQLEDDILPAEAERRYQEYKTEYISTQKRTYFNSHKDEEWLKDKYHPTNLLTVIERYVYKLGVH* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2521 263 MobiDBLite consensus disorder prediction 11 45 - -
Lja3g2521 263 MobiDBLite consensus disorder prediction 46 106 - -
Lja3g2521 263 MobiDBLite consensus disorder prediction 1 139 - -
Lja3g2521 263 MobiDBLite consensus disorder prediction 156 175 - -
Lja3g2521 263 Pfam SERRATE/Ars2, N-terminal domain 196 252 IPR021933 -
Lja3g2521 263 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 255 IPR039727 GO:0006397
Lja3g2521 263 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 255 - -
Lja3g2521 263 SUPERFAMILY Formin homology 2 domain (FH2 domain) 27 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2521 Lja-Chr3 32315512 32321233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2521 77 255 C2H2 Transcription Factor Family AT2G27100 57.488 9.01e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2521 - - lja:Lj3g3v1739290.1 277.715